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Re: [oor-forum] [bioportal-announce] BioPortal 3.2 Released

To: Trish Whetzel <whetzel@xxxxxxxxxxxx>
Cc: OpenOntologyRepository-discussion <oor-forum@xxxxxxxxxxxxxxxx>
From: Peter Yim <peter.yim@xxxxxxxx>
Date: Tue, 6 Sep 2011 17:49:28 -0700
Message-id: <CAGdcwD0WQATOqWVhrgvJh1CxfcXbxdq0DX13-ZqgPdTofDjibQ@xxxxxxxxxxxxxx>
This is great, Trish. Congrats to your entire team on this new release!    (01)

Is the <ncbo-appliance-0.3.ova> vm "appliance" an image of this
BioPortal 3.2 version, or is that of a previous version? ... If it's
the latter, which version? and, do you have an ETA for the vm image
for BioPortal 3.2?    (02)

Thanks & regards.  =ppy
--    (03)

On Tue, Sep 6, 2011 at 5:36 PM, Trish Whetzel <whetzel@xxxxxxxxxxxx> wrote:
> The National Center for Biomedical Ontology is pleased to announce the
> release of BioPortal 3.2.  New features include updates to the Web interface
> and Web services:
> Added Ontology Recommender feature,
> http://bioportal.bioontology.org/recommender
> Added support for access control for viewing ontologies
> Added link to subscribe to BioPortal Notes emails
> Synchronized “Jump To” feature with ontology parsing and display
> Added documentation on Ontology Groups
> Annotator Web service – disabled use of “longest only” parameter when also
> selecting “ontologies to expand” parameter
> Removed the metric "Number of classes without an author"
> Handling of obsolete terms, part 1 – term name is grayed out and
> <is_obsolete> element is returned in Web service response for obsolete terms
> from OBO and RRF ontologies. This feature will be extended to cover OWL
> ontologies in a subsequent release.
> Bug Fix
> Fixed calculation of “Classes with no definition” metric
> Added re-direct from old BioPortal URL format to new URL format to provide
> working links from archived search results
> Firefox Extension for NCBO API Key:
> To make it easier to test Web service calls from your browser, we have
> released the NCBO API Key Firefox Extension. This extension will
> automatically add your API Key to NCBO REST URLs any time you visit them in
> Firefox. The extension is available at Mozilla's Add-On site. To use the
> extension, follow the installation directions, restart Firefox, and add your
> API Key into the “Options” dialog menu on the Add-Ons management screen.
> After that, the extension will automatically append your stored API Key any
> time you visit http://rest.bioontology.org.
> Upcoming software license change:
> The next release of NCBO software will be under the two-clause BSD license
> rather than under the currently used three-clause BSD license. This change
> should not affect anyone’s use of NCBO software and this change is to a less
> restrictive license. More information about these licenses is available at
> the site: http://www.opensource.org/licenses. Please contact
> support@xxxxxxxxxxxxxxx with any questions concerning this change.
> Trish Whetzel, PhD
> Outreach Coordinator
> The National Center for Biomedical Ontology
> Ph: 650-721-2378
> whetzel@xxxxxxxxxxxx
> http://www.bioontology.org
> http://twitter.com/#!/bioontology
> _______________________________________________
> bioportal-announce mailing list
> bioportal-announce@xxxxxxxxxxxxxxxxxx
> https://mailman.stanford.edu/mailman/listinfo/bioportal-announce    (04)

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