Hi Cameron, (01)
> [CR] 1) Exactly which version of the BioPortal code base is being
> considered as the starting point for OOR? (02)
[ppy] the plan is to do do that at v2.5
Noting that we are still running v2.4 on the OOR-sandbox instance
ref. http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR_SandBox
... and are awaiting for the notification when the v2.5 codes are
ready for download, inclusive of the UI updates cited in Paul
Alexander's http://ontolog.cim3.net/forum/oor-dev/2010-07/msg00000.html
message. (03)
> [CR] 2) Are there plans to fork the BioPortal code base for the OOR? (04)
[ppy] Yes (a decision from our original plan of "branching off the
BioPortal repository" to "forking and supporting continuing
development at the <oor.semwebcentral.org> code repository" was made
during our 19-Feb-2010 "Coordinating our Open Ontology Repository
Software Development" session (ref.
http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2010_02_19#nid29RO
) (05)
> [CR] If so, what is the justification for forking? (06)
[ppy] among others, BioPortal is a project (funded by NIH) with a
totally different mission ... (despite the fact that their technology
is domain neutral and their generosity just turns out to provide a
great take off point for the OOR team.) (07)
Regards. =ppy
-- (08)
On Sat, Jul 24, 2010 at 7:11 AM, Cameron Ross <cross@xxxxxxxxxxxx> wrote:
> Thanks Todd and Peter.
> Although interesting, class diagrams and package diagrams don't portray the
> software architecture per se. I've attached a high level representation of
> the BioPortal 2 architecture taken from
>
>here: https://bmir-gforge.stanford.edu/gf/project/bioportal_core/docman/?subdir=27.
> This is the starting point I'm looking for. Some questions though:
> 1) Exactly which version of the BioPortal code base is being considered as
> the starting point for OOR?
> 2) Are there plans to fork the BioPortal code base for the OOR? If so, what
> is the justification for forking? (sorry if I'm rehashing stuff here). (09)
> On Fri, Jul 23, 2010 at 10:51 PM, Peter Yim <peter.yim@xxxxxxxx> wrote:
>>
>> > [TS] 3) Somewhere I posted a UML model of a version of
>> > BioPortal from 2008(?) which is now out of date. ...
>>
>> [ppy] Todd, Cameron and All,
>> ... that actually happened in 2009 (not 2008).
>> Ref. details at:
>> http://ontolog.cim3.net/cgi-bin/wiki.pl?OpenOntologyRepository#nid1YWK
>>
>> Best. =ppy
>> -- (010)
>> On Fri, Jul 23, 2010 at 3:51 PM, Todd J Schneider
>> <todd.schneider@xxxxxxxxxxxx> wrote:
>> > Cameron,
>> >
>> > 1) There's just a bit OOR material on the SemWebCentral
>> > site. Some early work of Mike Dean to sketch an
>> > outline.
>> >
>> > 2) Currently there is no specification per se. There
>> > some requirements
>> >
>> >
>> > http://ontolog.cim3.net/cgi-bin/wiki.pl?OpenOntologyRepository_Requirement
>> > and the Communique of the 2008 Ontology Summit gives
>> > an indication of where we expect to go,
>> > http://ontolog.cim3.net/cgi-bin/wiki.pl?OntologySummit2008_Communique
>> >
>> > 3) Somewhere I posted a UML model of a version of BioPortal
>> > from 2008(?) which is now out of date. As soon as I get
>> > the new source code I can create an updated model.
>> >
>> >
>> > Todd (011)
>> > From:
>> > Cameron Ross <cross@xxxxxxxxxxxx>
>> > To:
>> > OpenOntologyRepository-discussion <oor-forum@xxxxxxxxxxxxxxxx>
>> > Date:
>> > 07/23/2010 05:47 PM
>> > Subject:
>> > [oor-forum] Where to begin a technical evaluation of the OOR
>> > Sent by:
>> > oor-forum-bounces@xxxxxxxxxxxxxxxx
>> >
>> >
>> >
>> > HI,
>> >
>> > I'm having problems finding a starting point to evaluate the OOR
>> > architecture and interfaces etc.
>> >
>> > 1) Is there OOR content on the SemWebCentral site? I went here:
>> > http://semwebcentral.org/scm/viewvc.php//?root=oor, but couldn't find
>> > anything.
>> > 2) Is this the most current specification of OOR? :
>> > http://ontolog.cim3.net/file/work/OOR/OOR-prototype--MikeDean_20080606/.
>> > 3) I've also been through http://ontolog.cim3.net/file/work/OOR.
>> >
>> > Thanks,
>> > Cameron.
>> > --
>> > Kojeware Corporation (012)
_________________________________________________________________
Message Archives: http://ontolog.cim3.net/forum/oor-forum/
Subscribe: mailto:oor-forum-join@xxxxxxxxxxxxxxxx
Config/Unsubscribe: http://ontolog.cim3.net/mailman/listinfo/oor-forum/
Shared Files: http://ontolog.cim3.net/file/work/OOR/
Wiki: http://ontolog.cim3.net/cgi-bin/wiki.pl?OpenOntologyRepository (013)
|