> UI code has been updated on oor-01f.cim3.net. (01)
Tejas, (02)
Exploring now seems to work well, and I was also able to add bidirectional
mappings between a couple geospatial ontologies (replicating everything I'd
previously added to the oor-01.cim3.net sandbox). (03)
Thanks again to you and Paul. (04)
Mike (05)
On Wed, Jan 27, 2010 at 7:26 PM, Paul R Alexander
>
> <palexander@xxxxxxxxxxxx> wrote:
>> Mike,
>>
>> This is due to some recent changes on the BioPortal Core which haven't been
>> deployed on OOR's side. I patched the OOR branch of the UI code to handle
>> both the new and old data and did some other minor merges so if the OOR code
>> is updated again everything should be good.
>>
>> Paul
>>
>>
>> On 1/26/10 9:38 PM, Mike Dean wrote:
>>
>> Peter and Mike please confirm you can access Admin portal @
>> http://oor-01f.cim3.net:8080/bioportal_admin/login.jsf
>>
>>
>> I'm now able to login.
>>
>> I see that the ontologies parsed at 11:30 and that Search now works!
>> However, we're now getting exceptions from the Explore links in the Browse
>> window, e.g. [1].
>>
>> Thanks to Paul, Misha, Tejas, and Jim for your help.
>>
>> Mike
>>
>> [1] http://oor-01f.cim3.net/visualize/10003
>>
>>
>>
>>
>> On Tue, Jan 26, 2010 at 10:53 PM, Jim Chatigny <jchatign@xxxxxxx> wrote:
>>
>>
>> In case it helps, here are my notes from installing the admin webapp. There
>> were a couple of issues: (a) the application id has to be set properly in
>> build.xml; and (b) there was a missing jar file. I seem to recall one or
>> another may have resulted in an "invalid credentials" error message.
>>
>> In any case, the procedure ultimately worked OK for me.
>>
>> Jim
>>
>>
>>
>> -----Original Message-----
>> From: Peter Yim [mailto:peter.yim@xxxxxxxx]
>> Sent: Tuesday, January 26, 2010 5:31 PM
>> To: Tejas Parikh
>> Cc: oor-dev
>> Subject: [oor-dev] OOR-sandbox admin portal access [was - Re:
>> browsingerrors in new sandbox]
>>
>>
>> Thanks, Tejas ...
>>
>> ... I still can't get in (to the admin portal) though.
>>
>> Guess we need help from the NCBO/BioPortal folks here ... Paul? Misha?
>>
>> Thanks in advance. =ppy
>> --
>>
>>
>> On Tue, Jan 26, 2010 at 7:20 PM, Tejas Parikh
>> <tejas@xxxxxxxxxxxxxxx> wrote:
>>
>>
>> Peter,
>>
>> The steps to make user account an admin account do not seem to be
>> right. I tried making my account an admin account and it
>>
>>
>> did not work.
>>
>>
>> I used following steps:
>> bioportal databse, ncbo.l.role table, what is the id for
>> ROLE_ADMINISTRATOR (e.g., 2824). Then, look in the
>>
>>
>> ncbo_user table for
>>
>>
>> your user (firstname and lastname col), and write down the user id
>> from the id column (e.g. 38312). Then go to ncbo_user_role
>>
>>
>> table and
>>
>>
>> edit the row that contains your user id in the user_id
>>
>>
>> column, and put
>>
>>
>> in the role_id column the administrator role id. E.g.
>> (user_id:38312,role_id:2824). Restart the backend and try
>>
>>
>> to log into
>>
>>
>> the bioportal_admin
>>
>>
>> Ken Baclawski, Mike Gruninger and Leo Obrst have not
>>
>>
>> created account
>>
>>
>> on oor-01f.cim3.net sandbox yet. Once they create their
>>
>>
>> accounts I can
>>
>>
>> make them admins.
>>
>>
>>
>> --Tejas
>>
>>
>>
>>
>> On Tue, Jan 26, 2010 at 10:15 PM, Peter Yim <peter.yim@xxxxxxxx>
>> wrote:
>>
>>
>> Tejas,
>>
>> Thank you very much.
>>
>> Have you created accounts for me and Mike, or do we have to create
>> our own. If the latter, please advise how.
>>
>> I actually already have an account ( username = PeterYim)
>>
>>
>> created on
>>
>>
>> oor-01, and it still works on oor-01f. However, when I use
>>
>>
>> that set
>>
>>
>> of credentials at the admin login, I am getting a "Invalid
>> credentials supplied" error. ... Any idea?
>>
>> Also, please provide Ken Baclawski, Mike Gruninger and Leo
>>
>>
>> Obrst with
>>
>>
>> access the admin portal as well.
>>
>> Thanks & regards. =ppy
>> --
>>
>>
>> On Tue, Jan 26, 2010 at 7:03 PM, Tejas Parikh
>>
>>
>> <tejas@xxxxxxxxxxxxxxx>
>>
>>
>> wrote:
>>
>>
>> Enabled ontology parser.
>>
>> # Ontology Parse Scheduler properties
>> # Enable/Disable scheduler service flag
>> ontology.parse.scheduler.enabled=true
>> # Scheduler cron expression
>> # Fire once every hour, at 30 past the hour: 0 30 * * * ? *
>> ontology.parse.scheduler.cronexpression=0 30 * * * ? *
>>
>> Also installed BioPortal Admin. It can be accessed at
>> http://oor-01f.cim3.net:8080/bioportal_admin/login.jsf
>>
>>
>> and made Mike
>>
>>
>> Dean and Peter Yim administrators using the steps given in the
>> install guide.
>>
>> Mike / Peter can you try to login and confirm that you
>>
>>
>> are able to
>>
>>
>> access the bioportal admin portal.
>>
>> Thanks,
>> --Tejas
>>
>>
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