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Re: [oor-dev] OOR-sandbox admin portal access [was - Re: browsingerrors

To: OpenOntologyRepository-development <oor-dev@xxxxxxxxxxxxxxxx>
From: Tejas Parikh <tejas@xxxxxxxxxxxxxxx>
Date: Wed, 27 Jan 2010 23:10:20 -0500
Message-id: <63274c481001272010u3325597doe9c7c6b6c2806bca@xxxxxxxxxxxxxx>
UI code has been updated on oor-01f.cim3.net.    (01)


--Tejas    (02)



On Wed, Jan 27, 2010 at 7:26 PM, Paul R Alexander
<palexander@xxxxxxxxxxxx> wrote:
> Mike,
>
> This is due to some recent changes on the BioPortal Core which haven't been
> deployed on OOR's side. I patched the OOR branch of the UI code to handle
> both the new and old data and did some other minor merges so if the OOR code
> is updated again everything should be good.
>
> Paul
>
>
> On 1/26/10 9:38 PM, Mike Dean wrote:
>
> Peter and Mike please confirm you can access Admin portal @
> http://oor-01f.cim3.net:8080/bioportal_admin/login.jsf
>
>
> I'm now able to login.
>
> I see that the ontologies parsed at 11:30 and that Search now works!
> However, we're now getting exceptions from the Explore links in the Browse
> window, e.g. [1].
>
> Thanks to Paul, Misha, Tejas, and Jim for your help.
>
>       Mike
>
> [1] http://oor-01f.cim3.net/visualize/10003
>
>
>
>
> On Tue, Jan 26, 2010 at 10:53 PM, Jim Chatigny <jchatign@xxxxxxx> wrote:
>
>
> In case it helps, here are my notes from installing the admin webapp. There
> were a couple of issues: (a) the application id has to be set properly in
> build.xml; and (b) there was a missing jar file. I seem to recall one or
> another may have resulted in an "invalid credentials" error message.
>
> In any case, the procedure ultimately worked OK for me.
>
> Jim
>
>
>
> -----Original Message-----
> From: Peter Yim [mailto:peter.yim@xxxxxxxx]
> Sent: Tuesday, January 26, 2010 5:31 PM
> To: Tejas Parikh
> Cc: oor-dev
> Subject: [oor-dev] OOR-sandbox admin portal access [was - Re:
> browsingerrors in new sandbox]
>
>
> Thanks, Tejas ...
>
> ... I still can't get in (to the admin portal) though.
>
> Guess we need help from the NCBO/BioPortal folks here ... Paul? Misha?
>
> Thanks in advance.  =ppy
> --
>
>
> On Tue, Jan 26, 2010 at 7:20 PM, Tejas Parikh
> <tejas@xxxxxxxxxxxxxxx> wrote:
>
>
> Peter,
>
> The steps to make user account an admin account do not seem to be
> right. I tried making my account an admin account and it
>
>
> did not work.
>
>
> I used following steps:
> bioportal databse, ncbo.l.role table, what is the id for
> ROLE_ADMINISTRATOR (e.g., 2824). Then, look in the
>
>
> ncbo_user table for
>
>
> your user (firstname and lastname col), and write down the user id
> from the id column (e.g. 38312). Then go to ncbo_user_role
>
>
> table and
>
>
> edit the row that contains your user id in the user_id
>
>
> column, and put
>
>
> in the role_id column the administrator role id. E.g.
> (user_id:38312,role_id:2824). Restart the backend and try
>
>
> to log into
>
>
> the bioportal_admin
>
>
> Ken Baclawski, Mike Gruninger and Leo Obrst have not
>
>
> created account
>
>
> on oor-01f.cim3.net sandbox yet. Once they create their
>
>
> accounts I can
>
>
> make them admins.
>
>
>
> --Tejas
>
>
>
>
> On Tue, Jan 26, 2010 at 10:15 PM, Peter Yim <peter.yim@xxxxxxxx>
> wrote:
>
>
> Tejas,
>
> Thank you very much.
>
> Have you created accounts for me and Mike, or do we have to create
> our own. If the latter, please advise how.
>
> I actually already have an account ( username = PeterYim)
>
>
> created on
>
>
> oor-01, and it still works on oor-01f. However, when I use
>
>
> that set
>
>
> of credentials at the admin login, I am getting a "Invalid
> credentials supplied" error. ... Any idea?
>
> Also, please provide Ken Baclawski, Mike Gruninger and Leo
>
>
> Obrst with
>
>
> access the admin portal as well.
>
> Thanks & regards.  =ppy
> --
>
>
> On Tue, Jan 26, 2010 at 7:03 PM, Tejas Parikh
>
>
> <tejas@xxxxxxxxxxxxxxx>
>
>
> wrote:
>
>
> Enabled ontology parser.
>
> # Ontology Parse Scheduler properties
> # Enable/Disable scheduler service flag
> ontology.parse.scheduler.enabled=true
> # Scheduler cron expression
> # Fire once every hour, at 30 past the hour: 0 30 * * * ? *
> ontology.parse.scheduler.cronexpression=0 30 * * * ? *
>
> Also installed BioPortal Admin. It can be accessed at
> http://oor-01f.cim3.net:8080/bioportal_admin/login.jsf
>
>
> and made Mike
>
>
> Dean and Peter Yim administrators using the steps given in the
> install guide.
>
> Mike / Peter can you try to login and confirm that you
>
>
> are able to
>
>
> access the bioportal admin portal.
>
> Thanks,
> --Tejas
>
>
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>    (03)

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