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Re: [oor-dev] OOR-sandbox admin portal access [was - Re: browsingerrors

To: OpenOntologyRepository-development <oor-dev@xxxxxxxxxxxxxxxx>
From: Paul R Alexander <palexander@xxxxxxxxxxxx>
Date: Wed, 27 Jan 2010 16:26:49 -0800
Message-id: <4B60D9C9.9090903@xxxxxxxxxxxx>
Mike,

This is due to some recent changes on the BioPortal Core which haven't been deployed on OOR's side. I patched the OOR branch of the UI code to handle both the new and old data and did some other minor merges so if the OOR code is updated again everything should be good.

Paul


On 1/26/10 9:38 PM, Mike Dean wrote:
Peter and Mike please confirm you can access Admin portal @
http://oor-01f.cim3.net:8080/bioportal_admin/login.jsf
    
I'm now able to login.

I see that the ontologies parsed at 11:30 and that Search now works!  However, we're now getting exceptions from the Explore links in the Browse window, e.g. [1].

Thanks to Paul, Misha, Tejas, and Jim for your help.

	Mike

[1] http://oor-01f.cim3.net/visualize/10003


  
On Tue, Jan 26, 2010 at 10:53 PM, Jim Chatigny <jchatign@xxxxxxx> wrote:
    
In case it helps, here are my notes from installing the admin webapp. There
were a couple of issues: (a) the application id has to be set properly in
build.xml; and (b) there was a missing jar file. I seem to recall one or
another may have resulted in an "invalid credentials" error message.

In any case, the procedure ultimately worked OK for me.

Jim

      
-----Original Message-----
From: Peter Yim [mailto:peter.yim@xxxxxxxx]
Sent: Tuesday, January 26, 2010 5:31 PM
To: Tejas Parikh
Cc: oor-dev
Subject: [oor-dev] OOR-sandbox admin portal access [was - Re:
browsingerrors in new sandbox]


Thanks, Tejas ...

... I still can't get in (to the admin portal) though.

Guess we need help from the NCBO/BioPortal folks here ... Paul? Misha?

Thanks in advance.  =ppy
--


On Tue, Jan 26, 2010 at 7:20 PM, Tejas Parikh
<tejas@xxxxxxxxxxxxxxx> wrote:
        
Peter,

The steps to make user account an admin account do not seem to be
right. I tried making my account an admin account and it
          
did not work.
        
I used following steps:
bioportal databse, ncbo.l.role table, what is the id for
ROLE_ADMINISTRATOR (e.g., 2824). Then, look in the
          
ncbo_user table for
        
your user (firstname and lastname col), and write down the user id
from the id column (e.g. 38312). Then go to ncbo_user_role
          
table and
        
edit the row that contains your user id in the user_id
          
column, and put
        
in the role_id column the administrator role id. E.g.
(user_id:38312,role_id:2824). Restart the backend and try
          
to log into
        
the bioportal_admin


Ken Baclawski, Mike Gruninger and Leo Obrst have not
          
created account
        
on oor-01f.cim3.net sandbox yet. Once they create their
          
accounts I can
        
make them admins.



--Tejas
          

        
On Tue, Jan 26, 2010 at 10:15 PM, Peter Yim <peter.yim@xxxxxxxx>
wrote:
          
Tejas,

Thank you very much.

Have you created accounts for me and Mike, or do we have to create
our own. If the latter, please advise how.

I actually already have an account ( username = PeterYim)
            
created on
        
oor-01, and it still works on oor-01f. However, when I use
            
that set
        
of credentials at the admin login, I am getting a "Invalid
credentials supplied" error. ... Any idea?

Also, please provide Ken Baclawski, Mike Gruninger and Leo
            
Obrst with
        
access the admin portal as well.

Thanks & regards.  =ppy
--


On Tue, Jan 26, 2010 at 7:03 PM, Tejas Parikh
            
<tejas@xxxxxxxxxxxxxxx>
        
wrote:
            
Enabled ontology parser.

# Ontology Parse Scheduler properties
# Enable/Disable scheduler service flag
ontology.parse.scheduler.enabled=true
# Scheduler cron _expression_
# Fire once every hour, at 30 past the hour: 0 30 * * * ? *
ontology.parse.scheduler.cronexpression=0 30 * * * ? *

Also installed BioPortal Admin. It can be accessed at
http://oor-01f.cim3.net:8080/bioportal_admin/login.jsf
              
and made Mike
        
Dean and Peter Yim administrators using the steps given in the
install guide.

Mike / Peter can you try to login and confirm that you
              
are able to
        
access the bioportal admin portal.

Thanks,
--Tejas
              
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