Paul or Someone from NCBO who might point us in the right direction ... (01)
Further to the earlier exchange with PatCassidy (below), looks like
his COSMO ontology (which Pat uploaded on 2010.02.11) is still "being
parsed" at the OOR-Sandbox (v2.x). (02)
(Not knowing what exactly to look for) I just went into the server and
check cpu workload on the <oor-01> vm. To my surprise, the cpu(s) is
running at 99.5% to 100% idle. ... I do notice that 19 (of the 116)
ontologies that are listed in the "Browse" page are supposed to be in
the state of "Parse Ontology." ... therefore, this doesn't sound
right! (03)
... Suggestions? (04)
Thanks & regards. =ppy
-- (05)
---------- Forwarded message ----------
From: Patrick Cassidy <pat@xxxxxxxxx>
Date: Fri, Feb 12, 2010 at 7:31 PM
Subject: RE: registration problem oor sandbox (v2.x)
To: Peter Yim <peter.yim@xxxxxxxx>
Cc: Tejas Parikh <tejas@xxxxxxxxxxxxxxx>, Paul R Alexander
<palexander@xxxxxxxxxxxx>, Ken Baclawski <kenb@xxxxxxxxxxx>, "Obrst,
Leo J." <lobrst@xxxxxxxxx>, Mike Dean <mdean@xxxxxxx> (06)
On the parsing time for the new sandbox:
>
> > [PatC] Any idea how long a 7000 element ontology should take to
> parse?
>
> [ppy] (I'm guessing, but) I don't think anyone knows* ... Please make
> a note on how long it is taking this time for COSMO, maybe when you
> are done, you can share the experience with all of us. [ *since
> different installs are running on fairly different hardware and
> platforms, and experiencing different work loads all the time. ] (07)
The COSMO is still "parsing" after over 24 hours. I see a parsing error for
the OWL-time ontology (didn't see that in the last version). Who is
maintaining the parser and display function? Any thoughts on how this can
be improved? (08)
The "explore" function is really valuable. I hope we can get it to be
consistently effective. Sorry I have no programming expertise to help out
here. (09)
Pat (010)
Patrick Cassidy
MICRA, Inc.
908-561-3416
cell: 908-565-4053
cassidy@xxxxxxxxx (011)
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