(apologies for cross-posting) ... (please distribute)
------------------------------------------------------- (01)
Call for Participation >> ODLS 2013 << Sep 16-17, Koblenz, Germany (02)
[1] http://tinyurl.com/odls-2013-en (in English)
http://tinyurl.com/odls-2013 (in German) (03)
Late registration deadline: !! September 6, 2013 !! [2,3] (04)
[2] http://www.informatik2013.de/attendance_en.html
[3] http://www.conftool.net/informatik2013/ (05)
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Workshop of Ontologies and Data in Life Sciences (ODLS 2013) (07)
part of INFORMATIK 2013 [4] (08)
Location & Registration
----------------------- (09)
ODLS 2013 is part of INFORMATIK 2013 [4], which will take place in
Koblenz, Germany, at Campus Koblenz of the University of Koblenz-Landau. (010)
INFORMATIK 2013 handles registration [2,3] and the overall local
organization, cf. pages on venue [5] and accommodation [6]. (011)
Important Dates for Participation
--------------------------------- (012)
* early registration (July 15, 2013)
* late registration September 06, 2013 <-- [approaching]
* post and on-site registration September 17, 2013
* workshop September 16-17, 2013 (013)
Invited Talk
---------------
Udo Hahn, University of Jena: "Ontology-Based Text Analytics" (014)
Program
------- (015)
Mon, Sep 16, 2013
14:00-15:30 (016)
* OPTIMAS-DW, MetaCrop and VANTED: A Case Study for Data Integration,
Curation and Visualisation in Life Sciences
Christian Colmsee, Tobias Czauderna, Eva Grafahrend-Belau,
Anja Hartmann, Matthias Lange, Martin Mascher, Stephan Weise,
Uwe Scholz, Falk Schreiber (017)
* Towards Biomedical Data Integration for Analyzing the Evolution of
Cognition
Amrapali Zaveri, Jens Lehmann, Katja Nowick (018)
* DICOM metadata as RDF
Michael Brunnbauer (019)
Mon, Sep 16, 2013
16:00-17:00 (020)
* Encapsulated Models for Reasoning and Decision Support
Ivana Cace, John-Jules Meyer, Carla Pieterman, Gerlof Valk (021)
* Using Life Science Data in SharePoint
Michael Erdmann, Daniel Hansch (022)
Tue, Sep 17, 2013
09:00-10:30 (023)
* Ontology-Based Text Analytics < Keynote >
Udo Hahn (024)
* How fit is OWL to represent realist ontologies? The semantics of
representational units in realist ontologies and the Web Ontology
Language
Daniel Kless, Ludger Jansen (025)
Tue, Sep 17, 2013
11:00-12:30 (026)
* BioTopLite: An Upper Level Ontology for the Life Sciences.
Evolution, Design and Application
Stefan Schulz, Martin Boeker (027)
* Representation, Realization, and Ascription of Functions for
Material Entities
Patryk Burek, Heinrich Herre (028)
* Ontological categories for fields and waves
Johannes Röhl (029)
Tue, Sep 17, 2013
14:00-15:30 (030)
* Ontological analysis of controlled vocabularies used in PSI/MSI
supported XML standards
Daniel Schober, Gerhard Mayer, Annick Moing, Martin Eisenacher,
Steffen Neumann (031)
* Measuring the Effect of a Guideline-based Training on Ontology
Design with a Competency Questions based Evaluation Approach
Martin Boeker, Niels Grewe, Johannes Röhl, Daniel Schober,
Stefan Schulz, Djamila Seddig-Raufie, Ludger Jansen (032)
* < Discussion > (033)
Goals of the Workshop
--------------------- (034)
Medicine, biology and life sciences produce hardly manageable and
comprehensible amounts of data, information, and knowledge. Their
computer-based processing, integration, as well as their conceptual
foundation and application presents ever new challenges to existing
methods of knowledge representation, data bases, and data analysis.
In the life sciences, enormous data sets are being produced in
connection with biological and medical experiments, aiming to unravel
biological interconnections for a better understanding in order to
offer patients the best possible therapies. Data management and data
processing in the life sciences ranges from the best possible
integration and usage of distributed, heterogeneous data to the best
possible obfuscation of medical data. (035)
This workshop integrates workshops of two series: the workshop series
"Data in Life Sciences" and "Ontologies in Biomedicine and Life
Sciences" (OBML), thereby connecting two important areas of biomedical
research. This connection covers the overall spectrum of biomedical
information processing, from experimental data acquisition and data
management, across analysis, structuring and interpretation of data,
up to the development of structures of knowledge in the form of
ontologies with their various applications. (036)
The workshop pursues the aim to gather scientists that work in these
fields in order to exchange ideas, to discuss new results and to
inspire collaboration. The workshop has an interdisciplinary
character. It fosters the collaboration between ontologists, computer
scientists, bio-informaticians, medical information scientists,
applied logicians, as well as cooperations with physicians,
bio-chemists, and biometricians. (037)
Organization
------------ (038)
Heinrich Herre, University of Leipzig (contact for ontology)
Wolfgang Müller, HITS gGmbH, Heidelberg (contact for data management) (039)
Robert Hoehndorf, University of Cambridge, UK
Ralf Hofestädt, University of Bielefeld
Klaus A. Kuhn, University of Technology Munich
Frank Loebe, University of Leipzig (040)
Local Organization
------------------
University of Koblenz-Landau
INFORMATIK 2013 Conference Secretariat [7]
Ruth Ehrenstein (041)
Links
-----
[1] Workshop website (042)
http://tinyurl.com/odls-2013-en (in English) (043)
http://tinyurl.com/odls-2013 (in German) (044)
[2] http://www.informatik2013.de/attendance_en.html (045)
[3] http://www.conftool.net/informatik2013/ (046)
[4] http://informatik2013.de (047)
[5] http://www.informatik2013.de/venue_en.html (048)
[6] http://www.informatik2013.de/accommodation_en.html (049)
[7] confsec@xxxxxxxxxxxxxx (050)
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