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Re: [oor-users] How do i get the REST links for the following?

To: OOR Users discussion <oor-users@xxxxxxxxxxxxxxxx>
From: Natasha Noy <noy@xxxxxxxxxxxx>
Date: Fri, 2 Oct 2009 09:20:34 -0700
Message-id: <61438A7B-D74B-4AB4-B053-1C2927C95B32@xxxxxxxxxxxx>
The version that OOR sandbox is running does have that version of the  
services. I tested a couple of them last night on the sandbox and thy  
worked fine.    (01)

Natasha    (02)


On Oct 2, 2009, at 9:02 AM, Kenneth Baclawski wrote:    (03)

> That version of the wiki page states
> "Note: The hierarchy services will be available in May, 2009"
> Does this mean that the OOR does not have these services?
>
> -- Ken
>
> ----- "Natasha Noy" <noy@xxxxxxxxxxxx> wrote:
>
>> Sorry -- indeed, these have changed in the newer versions of
>> BioPortal. This version of the wiki page corresponds to the version
>> on the sandbox:
>>
>> http://www.bioontology.org/wiki/index.php?
>> title=BioPortal_REST_services&oldid=8833
>>
>> Natasha
>>
>> On Oct 1, 2009, at 7:09 PM, kenb@xxxxxxxxxxx wrote:
>>
>>> Unfortunately, this does not work.  While the "ontologies"
>>> service works, others do not.  For example, hierarchy
>>> services such as "Get parents/children of a given concept
>>> in a specific ontology version" don't seem to work.
>>> I presume that either the service signatures have changed
>>> or the services were not available in the earlier version
>>> of BioPortal.  It would be helpful to indicate how the
>>> calls documented in
>>> http://www.bioontology.org/wiki/index.php/NCBO_REST_services
>>> differ from those in the OOR.
>>>
>>> Thanks,
>>>
>>> -- Ken
>>>
>>> ----- "Natasha Noy" <noy@xxxxxxxxxxxx> wrote:
>>>
>>>> The following link works for REST services:
>>>> http://oor-01.cim3.net:8080/bioportal/....
>>>>
>>>> You can get the remainder of the call from here
>>>> http://www.bioontology.org/wiki/index.php/NCBO_REST_services
>>>>
>>>> So, for example, you can get a listing of latest versions of all
>>>> ontologies in the sandbox from
>>>> http://oor-01.cim3.net:8080/bioportal/ontologies
>>>>
>>>> I hope this helps.
>>>>
>>>> Natasha
>>>>
>>>>
>>>> On Sep 27, 2009, at 11:42 AM, sumit purohit wrote:
>>>>
>>>>> Hi pranav,
>>>>>
>>>>> i think sandbox link is not working for mentioned functions, so
>> use
>>>>
>>>>> bioportal links .
>>>>> bioportal links are on wiki page.
>>>>>
>>>>> hope it will  help
>>>>> --sumit
>>>>>
>>>>>
>>>>>
>>>>> On Sun, Sep 27, 2009 at 1:46 PM, Pranav S Bhat
>> <pbhat@xxxxxxxxxxx>
>>>>
>>>>> wrote:
>>>>> Hello all,
>>>>> I tried to search for the links for the REST interface for the
>>>>> following functions and couldnt find the links for them. It would
>> be
>>>>
>>>>> great if someone could redirect me to them!
>>>>>
>>>>> Get parents/children of a given concept in a specific ontology
>>>> version
>>>>> Get parents/children of a given concept in the latest version of
>> a
>>>>
>>>>> given ontology
>>>>> Get paths to roots/leaves from a concept in a specific ontology
>>>>> version
>>>>> Get paths to root/leaves from a concept in the latest version of
>> a
>>>>
>>>>> given ontology
>>>>>
>>>>> Thanks.
>>>>>
>>>>> Pranav.
>>>>>
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>    (04)


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