Exporting package to 'C:\temp\BioPortalUML\July29_ver1016\BioPortal_v1016_Jul2009_EA-Model.xml' Retrieving data for export: diagram elements Retrieving data for export: links Retrieving data for export: constraints Retrieving data for export: attribute tagged values Retrieving data for export: operation tagged values Retrieving data for export: operation parameter tagged values Retrieving data for export: connector tagged values Completed data retrieval Pre-processing export tree... Completed pre-processing Processing package: Class Model Diagram: Class Model Element:0: Note Processing package: org Processing package: ncbo Processing package: stanford Processing package: bean Diagram: bean Element:1: AbstractIdBean Element:2: ApplicationBean Element:3: CategoryBean Element:4: ContactTypeBean Element:5: MetadataFileBean Element:6: OntologyBean Element:7: OntologyIdBean Element:8: OntologyVersionIdBean Element:9: UserBean Processing package: concept Diagram: concept Element:10: AbstractConceptBean Element:11: ClassBean Element:12: InstanceBean Element:13: PropertyBean Processing package: http Diagram: http Element:14: HttpInputStreamWrapper Processing package: obs Diagram: obs Element:15: AbstractConceptBean Element:16: ChildBean Element:17: ConceptBean Element:18: OntologyBean Element:19: ParentBean Element:20: PathBean Element:21: SemanticTypeBean Element:22: SiblingBean Processing package: response Diagram: response Element:23: AbstractResponseBean Element:24: ErrorBean Element:25: ErrorStatusBean Element:26: SuccessBean Processing package: search Diagram: search Element:27: LexGridSearchProperty Element:28: OntologyHitBean Element:29: OntologyHitMap Element:30: ProtegeSearchFrame Element:31: SearchBean Element:32: SearchField Element:33: SearchIndexBean Element:34: SearchResultListBean Processing package: domain Processing package: custom Processing package: dao Diagram: dao Element:35: CustomNcboAdminApplicationDAO Element:36: CustomNcboAppTextDAO Element:37: CustomNcboLAdditionalMetadataDAO Element:38: CustomNcboLAppTextDatatypeDAO Element:39: CustomNcboLCategoryDAO Element:40: CustomNcboLRoleDAO Element:41: CustomNcboLStatusDAO Element:42: CustomNcboOntologyAdditionalVersionMetadataDAO Element:43: CustomNcboOntologyCategoryDAO Element:44: CustomNcboOntologyDAO Element:45: CustomNcboOntologyFileDAO Element:46: CustomNcboOntologyLoadQueueDAO Element:47: CustomNcboOntologyVersionDAO Element:48: CustomNcboOntologyVersionMetadataDAO Element:49: CustomNcboUserDAO Element:50: CustomNcboUserRoleDAO Processing package: entity Diagram: entity Element:51: VNcboOntology Processing package: generated Diagram: generated Element:52: AbstractNcboAdminApplication Element:53: AbstractNcboAppText Element:54: AbstractNcboLAdditionalMetadata Element:55: AbstractNcboLAppTextDatatype Element:56: AbstractNcboLCategory Element:57: AbstractNcboLRole Element:58: AbstractNcboLStatus Element:59: AbstractNcboOntology Element:60: AbstractNcboOntologyAdditionalVersionMetadata Element:61: AbstractNcboOntologyCategory Element:62: AbstractNcboOntologyFile Element:63: AbstractNcboOntologyLoadQueue Element:64: AbstractNcboOntologyVersion Element:65: AbstractNcboOntologyVersionMetadata Element:66: AbstractNcboUser Element:67: AbstractNcboUserRole Element:68: NcboAdminApplication Element:69: NcboAdminApplicationDAO Element:70: NcboAppText Element:71: NcboAppTextDAO Element:72: NcboLAdditionalMetadata Element:73: NcboLAdditionalMetadataDAO Element:74: NcboLAppTextDatatype Element:75: NcboLAppTextDatatypeDAO Element:76: NcboLCategory Element:77: NcboLCategoryDAO Element:78: NcboLRole Element:79: NcboLRoleDAO Element:80: NcboLStatus Element:81: NcboLStatusDAO Element:82: NcboOntology Element:83: NcboOntologyAdditionalVersionMetadata Element:84: NcboOntologyAdditionalVersionMetadataDAO Element:85: NcboOntologyCategory Element:86: NcboOntologyCategoryDAO Element:87: NcboOntologyDAO Element:88: NcboOntologyFile Element:89: NcboOntologyFileDAO Element:90: NcboOntologyLoadQueue Element:91: NcboOntologyLoadQueueDAO Element:92: NcboOntologyVersion Element:93: NcboOntologyVersionDAO Element:94: NcboOntologyVersionMetadata Element:95: NcboOntologyVersionMetadataDAO Element:96: NcboUser Element:97: NcboUserDAO Element:98: NcboUserRole Element:99: NcboUserRoleDAO Processing package: enumeration Diagram: enumeration Element:100: ErrorTypeEnum Element:101: SearchRecordTypeEnum Element:102: StatusEnum Processing package: exception Diagram: exception Element:103: ApplicationNotFoundException Element:104: ConceptNotFoundException Element:105: DatabaseException Element:106: InvalidCompressedFileHandlerException Element:107: InvalidDataException Element:108: InvalidMethodCallException Element:109: InvalidOntologyFormatException Element:110: InvalidParameterException Element:111: OntologyNotFoundException Element:112: OntologyVersionNotFoundException Processing package: manager Diagram: manager Element:113: AbstractOntologyManagerLexGrid Element:114: AbstractOntologyManagerProtege Processing package: diff Diagram: diff Element:115: OntologyDiffManager Processing package: impl Diagram: impl Element:116: OntologyDiffManagerLexGridImpl Element:117: OntologyDiffManagerProtegeImpl Processing package: load Diagram: load Element:118: OntologyLoadManager Processing package: impl Diagram: impl Element:119: OntologyLoadManagerLexGridImpl Element:120: OntologyLoadManagerProtegeImpl Processing package: obs Diagram: obs Element:121: OBSManager Processing package: impl Diagram: impl Element:122: OBSManagerImpl Processing package: retrieval Diagram: retrieval Element:123: OntologyRetrievalManager Processing package: impl Diagram: impl Element:124: OntologyRetrievalManagerLexGridImpl Element:125: OntologyRetrievalManagerProtegeImpl Processing package: search Diagram: search Element:126: OntologySearchManager Processing package: impl Diagram: impl Element:127: OntologySearchManagerLexGridImpl Element:128: OntologySearchManagerProtegeImpl Processing package: service Processing package: concept Diagram: concept Element:129: ConceptService Processing package: impl Diagram: impl Element:130: ConceptServiceImpl Processing package: diff Diagram: diff Element:131: DiffService Processing package: impl Diagram: impl Element:132: DiffServiceImpl Processing package: encryption Diagram: encryption Element:133: EncryptionService Processing package: impl Diagram: impl Element:134: EncryptionServiceImpl Processing package: loader Processing package: remote Diagram: remote Element:135: OBOCVSPullService Processing package: impl Diagram: impl Element:136: ActionEnum Element:137: OBOCVSPullServiceImpl Element:138: OntologyAction Processing package: scheduler Diagram: scheduler Element:139: OntologyLoadSchedulerService Processing package: impl Diagram: impl Element:140: OntologyLoadSchedulerServiceImpl Processing package: ontology Diagram: ontology Element:141: OntologyService Processing package: impl Diagram: impl Element:142: OntologyServiceImpl Processing package: search Diagram: search Element:143: AbstractSearchService Element:144: IndexSearchService Element:145: QuerySearchService Processing package: impl Diagram: impl Element:146: IndexSearchServiceImpl Element:147: QuerySearchServiceImpl Processing package: session Diagram: session Element:148: RESTfulSession Element:149: SessionService Processing package: impl Diagram: impl Element:150: SessionServiceImpl Processing package: user Diagram: user Element:151: UserService Processing package: impl Diagram: impl Element:152: UserServiceImpl Processing package: xml Diagram: xml Element:153: XMLSerializationService Processing package: converters Diagram: converters Element:154: OntologyHitMapConverter Element:155: SearchResultListBeanConverter Processing package: impl Diagram: impl Element:156: XMLSerializationServiceImpl Processing package: util Diagram: util Element:157: CompressionUtils Element:158: CompressionUtilsHolder Element:159: JarCompressedEntry Element:160: JarCompressedInputStream Element:161: MessageUtils Element:162: RequestUtils Element:163: TarCompressedEntry Element:164: TarCompressedInputStream Element:165: ZipCompressedEntry Element:166: ZipCompressedInputStream Element:167: CompressedEntry Element:168: CompressedInputStream Processing package: cache Diagram: cache Element:169: GloballyUniqueKey Processing package: container Diagram: container Element:170: HashbeltContainer Element:171: HashbeltContainerFactory Processing package: impl Diagram: impl Element:172: FastIteratingHashbeltContainer Element:173: FastIteratingHashbeltContainerFactory Element:174: HashlistBasedHashbeltContainer Element:175: HashlistBasedHashbeltContainerFactory Element:176: ProtegeKnowledgeBaseContainer Element:177: ProtegeKnowledgeBaseContainerFactory Element:178: StandardHashbeltContainer Element:179: StandardHashbeltContainerFactory Processing package: expiration Processing package: handler Diagram: handler Element:180: AbstractReinsertingExpirationHandler Element:181: AbstractSimpleExpirationHandler Element:182: ExpirationHandler Processing package: impl Diagram: impl Element:183: NullExpirationHandler Element:184: ProtegeKnowledgeBaseExpirationHandler Element:185: SimpleExpirationHandler Processing package: system Diagram: system Element:186: AbstractExpirationSystem Element:187: AbstractHashbeltExpirationSystem Element:188: ExpirationThread Element:189: ExpirationSystem Processing package: impl Diagram: impl Element:190: StandardHashbeltExpirationSystem Element:191: UpdatingHashbeltExpirationSystem Processing package: constants Diagram: constants Element:192: AppTextKeywordConstants Element:193: ApplicationConstants Processing package: cvs Diagram: cvs Element:194: CVSFile Element:195: CVSTestUI Element:196: CVSUtils Processing package: diff Diagram: diff Element:197: DiffUtils Processing package: difffile Processing package: pathhandler Diagram: pathhandler Element:198: DiffFilePathHandler Processing package: impl Diagram: impl Element:199: DiffFilePathHandlerImpl Element:200: DiffListFilter Processing package: helper Diagram: helper Element:201: BeanHelper Element:202: DateHelper Element:203: StringHelper Processing package: reflection Diagram: reflection Element:204: ArgumentHolder Element:205: ReflectionHelper Processing package: lucene Diagram: lucene Element:206: PrefixQuery Processing package: messages Diagram: messages Element:207: Messages Processing package: ontologyfile Diagram: ontologyfile Element:208: OntologyDescriptorParser Processing package: compressedfilehandler Diagram: compressedfilehandler Element:209: AbstractCompressedFileHandler Element:210: CompressedFileHandler Processing package: impl Diagram: impl Element:211: CompressedFileHandlerFactory Element:212: LEXGRID_XMLCompressedFileHandlerImpl Element:213: OBOCompressedFileHandlerImpl Element:214: OWLCompressedFileHandlerImpl Element:215: PROTEGECompressedFileHandlerImpl Element:216: RRFCompressedFileHandlerImpl Processing package: pathhandler Diagram: pathhandler Element:217: AbstractFilePathHandler Element:218: FilePathHandler Processing package: impl Diagram: impl Element:219: CommonsFileUploadFilePathHandlerImpl Element:220: PhysicalDirectoryFilePathHandlerImpl Processing package: paginator Diagram: paginator Element:221: Paginatable Element:222: Paginator Processing package: impl Diagram: impl Element:223: Page Element:224: PaginatableList Element:225: PaginatorImpl Processing package: security Processing package: context Diagram: context Element:226: OnRedirectUpdateSessionResponseWrapper Element:227: RESTfulContextIntegrationFilter Processing package: intercept Processing package: web Diagram: web Element:228: EntryHolder Element:229: RESTfulDefinitionSource Element:230: RESTfulDefinitionSourceMapping Element:231: RESTfulPathBasedFilterInvocationDefinitionMap Processing package: providers Processing package: dao Diagram: dao Element:232: AbstractRESTfulUserDetailsAuthenticationProvider Element:233: RESTfulDaoAuthenticationProvider Element:234: UserApplicationCache Processing package: cache Diagram: cache Element:235: EhCacheBasedUserApplicationCache Element:236: NullUserApplicationCache Processing package: ui Diagram: ui Element:237: ApplicationAuthenticationDetails Element:238: RESTfulExceptionTranslationFilter Processing package: userdetails Diagram: userdetails Element:239: ApplicationDetailsService Processing package: jdbc Diagram: jdbc Element:240: ApplicationByApplicationIdMapping Element:241: JdbcApplicationDaoImpl Processing package: textmanager Processing package: service Diagram: service Element:242: TextManager Processing package: impl Diagram: impl Element:243: TextManagerImpl Processing package: tagprocessor Diagram: tagprocessor Element:244: TextTagProcessor Processing package: tag Diagram: tag Element:245: TextTag Element:246: TextTagImport Element:247: TextTagKeyword Element:248: TextTagSetkeyword Processing package: view Processing package: filter Diagram: filter Element:249: ApplicationSessionFilter Element:250: CharsetFilter Element:251: MultipartFilter Processing package: rest Processing package: authentication Diagram: authentication Element:252: AuthenticationRestlet Processing package: base Diagram: base Element:253: RestApplication Element:254: RestManager Processing package: restlet Diagram: restlet Element:255: AbstractBaseRestlet Processing package: concept Diagram: concept Element:256: ConceptChildrenRestlet Element:257: ConceptChildrenVirtualRestlet Element:258: ConceptLeavesRestlet Element:259: ConceptLeavesVirtualRestlet Element:260: ConceptParentsRestlet Element:261: ConceptParentsVirtualRestlet Element:262: ConceptRestlet Element:263: ConceptRootPathRestlet Element:264: ConceptRootPathVirtualRestlet Element:265: ConceptSiblingsRestlet Element:266: ConceptSiblingsVirtualRestlet Processing package: diff Diagram: diff Element:267: DiffDownloadRestlet Element:268: DiffRestlet Processing package: loader Processing package: remote Diagram: remote Element:269: OBOCVSPullRestlet Processing package: ontology Diagram: ontology Element:270: CategoriesRestlet Element:271: OntologiesActiveRestlet Element:272: OntologiesParseRestlet Element:273: OntologiesRestlet Element:274: OntologyDownloadRestlet Element:275: OntologyRestlet Element:276: OntologyVersionsRestlet Element:277: VirtualUriRestlet Processing package: path Diagram: path Element:278: PathRestlet Processing package: search Diagram: search Element:279: IndexRestlet Element:280: MetaDataSearchRestlet Element:281: QueryRestlet Processing package: user Diagram: user Element:282: UserEmailRestlet Element:283: UserRestlet Element:284: UsersRestlet Processing package: util Processing package: constants Diagram: constants Element:285: RequestParamConstants Processing package: wrapper Diagram: wrapper Element:286: LuceneIndexWriterWrapper Sequencing Interaction Diagrams Formatting output XML...please wait XMI Document Export Complete!