Open Ontology Repository (OOR) Initiative - Home Page (17YG)
Most Critical Task(s) At Hand: (17YH)
- set up policies and process and policies for contributing to OOR work (1PZR)
- get OOR development going (1TAJ)
- get the work funded (1TID)
- collecting OpenOntologyRepository_UseCases (1VMD)
- (insert items here) (1P5V)
What's New: (17YJ)
- next OOR-Team (regular) conference call: 2009_08_14 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_08_14 T (1X6V)
- 2009_08_06 - Thursday: Joint Ontolog-OOR Panel Discussion: "Ontology Repository Research Issues" - Chair: KenBaclawski - Panelists: MichaelGruninger, ElisaKendall, BartGajderowicz, MathieuDaquin & ToddSchneider - ConferenceCall_2009_08_06 T (20DS)
- 2009_07_30 - Thursday: Joint Ontolog-OOR Panel Discussion: "BioPortal and related Ontology Repository Implementations and Development" (Take-3) - Chair: NatashaNoy - Panelists: CarlosRueda, PaulAlexander, JohnGraybeal, MikeDean, StephenGranite, AlexGarcia, KenBaclawski - ConferenceCall_2009_07_30 T (20DR)
- 2009_07_16 - Thursday: Joint Ontolog-OOR Panel Discussion: "Integrated tools for ontology development and management: A field guide to the Stanford technology" - Chair: MarkMusen - Panelists: TaniaTudorache, TimRedmond, NatashaNoy - ConferenceCall_2009_07_16 T (20DQ)
- 2009_05_19 - UML Model of the NCBO BioPortal 2.0 Core (which forms the code-base for our OOR platform development) was reverse engineered and posted by ToddSchneider - see overview at: http://ontolog.cim3.net/cgi-bin/wiki.pl?OpenOntologyRepository_Architecture#nid1YKD (1YWK)
- 2009_06_14 - the full UML model is available at: http://ontolog.cim3.net/file/work/OOR/oor-dev/BioPortal_3Mar2009_UML-Model_ToddSchneider_20090614/index.html (1YWL)
- 2009_04_16 - Thursday: OOR Use Cases Discussion Session - Chair: KatherineGoodier - ConferenceCall_2009_04_16 (1X6U)
- 2009.02.19 - Our first public sandbox instance of an OOR, based on the NCBO BioPortal technology (and donated by an joint effort of NCBO, Stanford-BMIR and CIM3) is now now - see: http://oor-01.cim3.net (1X6W)
- 2009_02_19 - Thursday: Joint Ontolog-OOR Panel Discussion: "Getting OOR Development Off the Ground (Take-2): the work begins" - Chair: ToddSchneider; Panelists: MarkMusen, NatashaNoy, MikeDean, PaulBuitelaar / AndreasHarth, MathieuDaquin, KenBaclawski, MichaelGruninger - ConferenceCall_2009_02_19 (1X6X)
- 2008_12_04 - Thursday: Joint Ontolog-OOR Panel Session - Co-chair: PaulBuitelaar & PeterYim; Panelist: Mathieu d'Aquin, MatthewHorridge & PaulBuitelaar - ConferenceCall_2008_12_04 (1X6Y)
- OOR preliminary proposal for the NSF 07-601 grant solicitation was submitted on 2008.11.13 - see: OpenOntologyRepository_Proposal/Nsf_07601 (1X6Z)
- FrankOlken delivered a well received talk on OOR at the CENDI/NKOS workshop held in Washington DC at the WorldBank on Sept. 11, 2008 workshop - see: Frank's slide presentation (1X70)
- 2008_08_22 - Friday: OOR Panel Discussion: "Getting OOR Development Off the Ground: Identifying Synergies & Gaps" - Chair: LeoObrst; Panelists: MikeDean, MarkMusen, LiDing, BruceBargmeyer & BillAndersen - ConferenceCall_2008_08_22 (1X71)
- Our team made a presentation with our history, status, OOR rationale and requirements, and a proposed roadmap at the OntologySummit2008 - see: http://ontolog.cim3.net/cgi-bin/wiki.pl?OntologySummit2008/FaceToFaceAgenda#nid1BLS (1X72)
- 2008_04_10 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Developing an Ontology of Ontologies for OOR" - Co-chairs: BarrySmith & MichaelGruninger; Panelists: MichaelGruninger, PeterHaase, NatashaNoy & ElisaKendall - ConferenceCall_2008_04_10 (1X73)
- 2008_04_03 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-2" - Chair: LeoObrst & FabianNeuhaus; Panelists: DougLenat, DekeSmith, MarciaZeng, DeniseBedford, PatHayes, MalaMehrotra & RobRaskin - ConferenceCall_2008_04_03 (1X74)
- 2008_03_27 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-1" - Chair: LeoObrst & FabianNeuhaus; Panelists: WilliamBug, EvanWallace, JohnLMcCarthy, KenBaclawski, PeterBenson & RexBrooks - ConferenceCall_2008_03_27 (1X75)
- 2008_02_28 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Ontology Registry and Repository Technology & Infrastructure Landscape" - Co-chairs: LeoObrst & FrankOlken; Panelists: BruceBargmeyer, MikeDean, MarkMusen, FarrukhNajmi & PeterYim - ConferenceCall_2008_02_28 (1X76)
- 2008_01_23 - Wednesday: OOR Initiative - Founding Members Conference Call - OOR/ConferenceCall_2008_01_23 (1YWY)
- 2008_01_03 - Thursday: Open Ontology Repository initiative - Planning Meeting - Co-conveners: PeterYim, LeoObrst & MikeDean - ConferenceCall_2008_01_03 (1YWZ)
Key Date(s) to Note: (17YL)
(insert content below) (1K4Y)
Project Mission (17YN)
The charter of the Open Ontology Repository (OOR) Initiative is to the promote the global use and sharing of ontologies by: (17ZH)
- 1. establishing a hosted registry-repository; (17ZI)
- 2. enabling and facilitating open, federated, collaborative ontology repositories, and (17ZJ)
- 3. establishing best practices for expressing interoperable ontology and taxonomy work in registry-repositories. (17ZK)
... where, (19K3)
"An ontology repository is a facility where ontologies and related information artifacts can be stored, retrieved and managed." T (19K5)
Note that the "Open Ontology Repository (OOR) Initiative" is supposed to be an independent effort, and is only being incubated in the Ontolog collaborative work environment, for the time being. (1K4W)
Current Action Items (responsible/champion) (17YQ)
- All members who don't yet have a populated "namesake page" on this wiki to put their respective affiliation, (obfuscated) email address and bio's there. (1822)
- All active members to enumerate what they are ready to 'bring to the table' with respect to this initiative. (1826)
- please make your entry (along with links and references) at: OOR/ActiveMemberContribution (1827)
Project Work-in-Progress (17YR)
We are in the process of establishing the following: (183J)
- OpenOntologyRepository_Scope - documentation related to this OOR initiative's mission, charter, objectives, goals, terms of reference, definitions, scope, ... etc. (17YS)
- OpenOntologyRepository_Requirement - documentation related to the requirements of the "open ontology repository" we are planning to implement through this OOR initiative. (183K)
- OpenOntologyRepository_Approach - documentation related to this OOR initiative's approach, and the process we will be using. (183L)
- OpenOntologyRepository_Architecture - documentation related to the architecture of the "open ontology repository" we are planning to implement through this OOR initiative. (183M)
- OpenOntologyRepository_Plan - documentation related to this OOR initiative's deliverables, timeline, milestones & deadlines, project plans, etc. (183N)
- OpenOntologyRepository_Funding - approach, opportunities and work-in-progress in terms of funding the OOR initiative. (1LQ7)
- OpenOntologyRepository_ResearchIssues - research issues that are pertinent to the design, development and operations of an "open ontology repository" (1MFT)
Project Plan (17YT)
- Establish Definitions and Scope (183O)
- Approach & Process (1823)
- Plan & Timeline (17YU)
- Deliverables & Deadlines (17YP)
Discussion Archives, Shared-File Workspace & System Development Repository (17YX)
- Discussion Archives: (17YY)
- [oor-forum] - archives to the (e-mail list) discussion on "Open Ontology Repository" initiative - http://ontolog.cim3.net/forum/oor-forum/ (17Z0)
- to participate in the virtual discourse, please subscribe to this [oor-forum] list by sending an empty (no message body is needed) message to: oor-forum-join [at] ontolog.cim3.net (or email <peter.yim @ cim3.com> if you have any question.) (17Z9)
- [oor-dev] - archives to the (e-mail list) discussion on the "Open Ontology Repository" development - http://ontolog.cim3.net/forum/oor-dev/ (17ZA)
- [oor-forum] - archives to the (e-mail list) discussion on "Open Ontology Repository" initiative - http://ontolog.cim3.net/forum/oor-forum/ (17Z0)
- Shared-File Workspace: . . . (open) (17YZ)
- OOR team's work - http://ontolog.cim3.net/file/work/OpenOntologyRepository/ . . . (which we have IPR on) (17ZM)
- Outside (reference) work, etc. - http://ontolog.cim3.net/file/resource/OpenOntologyRepository/ . . . (which we may re-publish here, but have no IPR on) (17ZN)
- content of this shared-file workspace are open to all read access, browsers, hyperlinking and search (17ZB)
- write access is limited to team members only, and is password protected. To gain write access, please refer to details at: http://ontolog.cim3.net/cgi-bin/wiki.pl?ToolsCollaboration#nidAVL (17ZC)
- Software development work is being done on the BioPortal (gforge-based) subversion repository (1UNY)
- see documentation at: http://www.bioontology.org/wiki/index.php/NCBO-OOR_Development (1UNZ)
- to contribute to the software development work, please sign-up at the project site (as per instructions there) or email <mike.dean @ bbn.com> to arrange for your participation) (1TGX)
- an alternative OOR sub-project repository is also available at SemWebCentral - http://oor.projects.semwebcentral.org (contact MikeDean for more details) (1JSY)
Conference Call, Meeting & Workshop (17Z4)
- 2009_08_28 - Friday: OOR Project Team Member Conference Call - PurpleWiki::InlineNode=HASH(0xa199384)->content (20DT)
- 2009_08_14 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_08_14 (20DU)
- 2009_07_24 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_07_24 (1ZLQ)
- 2009_07_10 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_07_10 (1YWI)
- 2009_06_26 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_06_26 (1YPJ)
- 2009_06_12 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_06_12 (1Y3Q)
- 2009_05_29 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_05_29 (1X77)
- 2009_05_15 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_05_15 (1X77)
- 2009_05_01 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_05_01 (1X78)
- 2009_04_16 - Thursday: OOR Use Cases Discussion Session - Chair: KatherineGoodier - ConferenceCall_2009_04_16 (1X79)
- 2009_04_03 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_04_03 (1X7A)
- 2009_03_20 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_03_20 (1X7B)
- 2009_03_06 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_03_06 (1X7C)
- 2009_02_19 - Thursday: Joint Ontolog-OOR Panel Discussion: "Getting OOR Development Off the Ground (Take-2): the work begins" - Chair: ToddSchneider; Panelists: MarkMusen, NatashaNoy, MikeDean, PaulBuitelaar / AndreasHarth, MathieuDaquin, KenBaclawski, MichaelGruninger - ConferenceCall_2009_02_19 (1X7D)
- 2009_02_06 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_02_06 (1X7E)
- 2009_01_23 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_01_23 (1X7F)
- 2009_01_09 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2009_01_09 (1X7G)
- 2008_12_12 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_12_12 (1X7H)
- 2008_11_14 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_11_14 (1X7I)
- 2008_11_07 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_11_07 (1X7J)
- 2008_10_17 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_10_17 (1X7K)
- 2008_10_10 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_10_10 (1X7L)
- 2008_10_03 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_10_03 (1X7M)
- 2008_09_19 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_09_19 (1X7N)
- 2008_09_05 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_09_05 (1X7O)
- 2008_08_29 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_08_29 (1X7P)
- 2008_08_22 - Friday: OOR Panel Discussion: "Getting OOR Development Off the Ground: Identifying Synergies & Gaps" - Chair: LeoObrst; Panelists: MikeDean, MarkMusen, LiDing, BruceBargmeyer & BillAndersen - ConferenceCall_2008_08_22 (1X7Q)
- 2008_08_08 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_08_08 (1X7R)
- 2008_07_25 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_07_25 (1X7S)
- 2008_07_11 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_07_11 (1X7T)
- 2008_06_06 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_06_06 (1X7U)
- 2008_05_23 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_05_23 (1X7V)
- 2008_05_09 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_05_09 (1X7W)
- 2008_04_28 - 04_29 - Monday~Tuesday: OntologySummit2008 face-to-face workshop, held during NIST's Interoperability Week (Gaithersburg, Maryland, USA) - see: OntologySummit2008/FaceToFaceAgenda o Our team made a presentation with our history, status, OOR rationale and requirements, and a proposed roadmap at the OntologySummit2008 - see: http://ontolog.cim3.net/cgi-bin/wiki.pl?OntologySummit2008/FaceToFaceAgenda#nid1BLS (1X7X)
- 2008_04_18 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_04_18 (1X7Y)
- 2008_04_10 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Developing an Ontology of Ontologies for OOR" - Co-chairs: BarrySmith & MichaelGruninger; Panelists: MichaelGruninger, PeterHaase, NatashaNoy & ElisaKendall - ConferenceCall_2008_04_10 (1X7Z)
- 2008_04_04 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_04_04 (1X80)
- 2008_04_03 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-2" - Chair: LeoObrst & FabianNeuhaus; Panelists: DougLenat, DekeSmith, MarciaZeng, DeniseBedford, PatHayes, MalaMehrotra & RobRaskin - ConferenceCall_2008_04_03 (1X81)
- 2008_03_27 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-1" - Chair: LeoObrst & FabianNeuhaus; Panelists: WilliamBug, EvanWallace, JohnLMcCarthy, KenBaclawski, PeterBenson & RexBrooks - ConferenceCall_2008_03_27 (1X82)
- 2008_03_21 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_03_21 (1X83)
- 2008_03_14 - Friday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_03_14 (1X84)
- 2008_03_05 - Wednesday: OOR Project Team Member Conference Call - OOR/ConferenceCall_2008_03_05 (1X85)
- 2008_02_28 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Ontology Registry and Repository Technology & Infrastructure Landscape" - Co-chairs: LeoObrst & FrankOlken; Panelists: BruceBargmeyer, MikeDean, MarkMusen, FarrukhNajmi & PeterYim - ConferenceCall_2008_02_28 (1X86)
- 2008_02_13 - Wednesday: OOR Initiative - Member Conference Call - OOR/ConferenceCall_2008_02_13 (1X87)
- 2008_01_23 - Wednesday: OOR Initiative - Founding Members Conference Call - OOR/ConferenceCall_2008_01_23 (1X88)
- 2008_01_03 - Thursday: Open Ontology Repository initiative - Planning Meeting - Co-conveners: PeterYim, LeoObrst & MikeDean - ConferenceCall_2008_01_03 (1X89)
Funding (1821)
- OOR preliminary proposal for the NSF 07-601 grant solicitation was submitted on 2008.11.13 - see: OpenOntologyRepository_Proposal/Nsf_07601 (1X8A)
- the proposal, unfortunately, was not accepted - see discussion at: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2009_05_01#nid1X61 (1X8B)
Publications & References (1LSM)
- KenBaclawski made a presentation on OOR at a meeting held at MBARI on 2009.06.15 - http://ontolog.cim3.net/file/work/OOR/OOR_presentations_publications/OOR-MBARI-Presentation--KenBaclawski_20090615.ppt (203S)
- MikeDean and PeterYim gave a "lightning-talk" at ISWC 2008 on OOR (2008.10.30) - http://ontolog.cim3.net/file/work/OOR/OOR_presentations_publications/OOR_iswc2008_lightning-talk--MikeDean-PeterYim_20081030.pdf (203R)
- Presentation on the OOR initiative at the CENDI/NKOS workshop (at the WorldBank 2008.09.11) by FrankOlken - slides (1LSN)
- Presentation by the OOR team at the OntologySummit2008 face-to-face workshop (2008.04.29) - slides (1LSO)
- OntologySummit2008 ... and, in particular, the OntologySummit2008_Communique (1LSQ)
Resources (17Z1)
- Open Repositories Conference 2008: Southamption, UK, Apr 1-4, 2008 (188Q)
The Team (17YV)
- Members: . . . the initial list (which has since been updated now) included those who were at (or responded to) the OOR Planning Meeting or the Founding Members Meeting - this list include active members as well as observers too (who may or may not have clearly identified themselves as such) (17YW)
- AndersTell (180W)
- AtillaElci (180X)
- BarrySmith (180Y)
- BenjaminDai (Stanford BMIR) (180Z)
- BobSmith (1810)
- BruceBargmeyer (XMDR; LBL) (1811)
- ChrisMenzel (1812)
- DeniseBedford (1813)
- DuaneNickull (1814)
- EvanWallace (NIST, OMG) (1BFC)
- FabianNeuhaus (NIST) (1BYL)
- FarrukhNajmi (1815)
- GerryCreager (Texas A&M University) (1816)
- JohnGraybeal (1817)
- JohnSowa (1818)
- KajalClaypool (MIT Lincoln Laboratory) (1819)
- KenBaclawski (181A)
- LeeFeigenbaum (Cambridge Semantics) (181B)
- LeoObrst (181C)
- LiDing (RPI) (181D)
- LuisBermudez (SURA) (181E)
- MarciaZeng (Kent State University, Ohio) (181F)
- MarkFeblowitz (181G)
- MarkMusen (181H)
- MichelleRaymond (181I)
- MikeDean (181J)
- DennisNicholson (Centre for Digital library Research, University of Strathclyde) (181K)
- PatHayes (181M)
- PatrickYee (Center for E-Commerce Infrastructure Development, HKU) (181N)
- PeterBrown (181O)
- PeterYim (181P)
- RaviSharma (181Q)
- RexBrooks (181R)
- RobRaskin (1DCG)
- RoyLowry (British Oceanographic Data Centre) (181S)
- SonDoan (1BRO)
- SteveRay (181T)
- TimMcGrath (181U)
- TimRedmond (181V)
- ToddSchneider (1EA4)
- ... also signed up (after the launch) are: (1K57)
- AmandaVizedom (1GT0)
- FrankAlvidrez (1H06)
- KGoodier (1H15)
- AlexGarcia (1HSJ)
- DeborahMcGuinness (1K58)
- HaroldSolbrig (1L13)
- NeilSarkar (1OK1)
- NatashaNoy (1OK2)
- TomWheeler (1OK3)
- PaulBuitelaar (1OK4)
- TrishWhetzel (Stanford-BMIR) (1OK5)
- MatthewHorridge (1POI)
- Mathieu d'Aquin (1POJ)
- AndreasHarth (1TEY)
- BartGajderowicz (1XRF)
- StephenGranite (1WO9)
- DarrenOng (1X6Q)
- FrankChum (1XLR)
- Observers: . . . those who are subscribed to the mailing list, but indicated their level of participation or responded to the meeting calls ... feel free to change your own membership category! (181W)
- KurtConrad (181X)
- FrankOlken (181Y)
- GaryBergCross (181Z)
- TraugottKoch (Max Planck Digital Library, Germany) (1820)