OOR Panel Discussion: "Getting OOR Development Going - Take-IV" Workshop - Fri 3-Sep-2010 (2GP5)
This session is sometimes referred to as the "fork" session. The key issue being addressed at this virtual workshop session is on how we should manage to incorporate various ongoing OOR-related software development efforts, and how best to "fork" from the BioPortal codebase while staying synergistic. (2GP6)
- Co-chairs: Professor MichaelGruninger (U of Toronto) and Dr. ToddSchneider (Raytheon) - [ [ slides] ] (2GP7)
- Panelists: (2GP8)
- Mr. MikeDean (Raytheon-BBN) - "" - [ [ slides] ] (2GP9)
- Dr. NatashaNoy (NCBO; Stanford-BMIR) - "" - [ [ slides] ] (2GPA)
- Professor KenBaclawski (Northeastern U) - "" - [ [ slides] ] (2GPB)
- Dr. AlexanderGarcia (Bremen U) - "" - [ [ slides] ] (2GPC)
- Professor JohnBateman (Bremen U; IAOA) - "" - [ [ slides] ] (2GPD)
- Professor MichaelGruninger (U of Toronto; IAOA) - "" - [ [ slides] ] (2GPE)
- Archive: (2GPF)
- Abstracts ... (coming!) (2GPG)
- Agenda & Proceedings (2GPH)
- Prepared presentation material can be accessed by clicking on each of the title links below: (2GPI)
- [ [ 0-Chair] ] . [ [ 1-Dean] ] . [ [ 2-Noy] ] . [ [ 3-Baclawski] ] . [ [ 4-Garcia] ] . [ [ 5-Batemen] ] . [ [ 6-Gruninger] ] ... (coming!) (2GPJ)
- [ [ audio recording of the session] ] ... (coming!) (2GPK)
- [ [ Transcript of the online chat session] ] during the panel discussion ... (coming!) (2GPL)
- Other Resources (2GPM)
Conference Call Details: (2GPN)
- Date: Friday, 3-September-2010 (2GPO)
- Start Time: 12:00pm EDT / 9:00am PDT / 6:00pm CEST / 5:00pm BST / 16:00 UTC (2GPP)
- ref: World Clock (2GPQ)
- Expected Call Duration: 2.0~2.5 hours (2GPR)
- Dial-in Number: (2GPS)
- Shared-screen support (VNC session) will be started 5 minutes before the call at: http://vnc2.cim3.net:5800/ (2GQ6)
- view-only password: "ontolog" (2GQ7)
- if you plan to be logging into this shared-screen option (which the speaker may be navigating), and you are not familiar with the process, please try to call in 5 minutes before the start of the session so that we can work out the connection logistics. Help on this will generally not be available once the presentation starts. (2GQ8)
- people behind corporate firewalls may have difficulty accessing this. If that is the case, please download the slides above and running them locally. The speaker(s) will prompt you to advance the slides during the talk. (2GQ9)
- Discussions and Q & A: (2GQA)
- (Unless the conference host has already muted everyone) Please mute your phone, by pressing "*2" on your phone keypad, when a presentation is in progress. To un-mute, press "*3" (2GQB)
- You can type in your questions or comments through the browser based chat session by: (2GQC)
- pointing a separate browser tab (or window) to http://webconf.soaphub.org/conf/room and enter: Room="ontolog_20100903" and My Name="Your Own Name" (e.g. "JaneDoe") (2GQD)
- or point your browser to: http://webconf.soaphub.org/conf/room/ontolog_20100903 (2GQE)
- instructions: once you got access to the page, click on the "settings" button, and identify yourself (by modifying the Name field). You can indicate that you want to ask a question verbally by clicking on the "hand" button, and wait for the moderator to call on you; or, type and send your question into the chat window at the bottom of the screen. (2GQF)
- (when everyone is muted) If you want to speak or have questions or remarks to make, 'please "raise your hand (virtually)" by click on the "hand button" (lower right) on the chat session page. You may speak when acknowledged by the speaker or the session moderator (again, press "*3" on your phone to unmute). Test your voice and introduce yourself first before proceeding with your remarks, please.'' (Please remember to click on the "hand button" again (to lower your hand) and press "*2" on your phone to mute yourself after you are done speaking.) (2GQG)
- thanks to the soaphub.org folks, one can now use a jabber/xmpp client (e.g. gtalk) to join this chatroom. Just add the room as a buddy - (in our case here) ontolog_20100903@soaphub.org ... Handy for mobile devices! (2GQH)
- Please review our Virtual Session Tips and Ground Rules - see: VirtualSpeakerSessionTips (2GQI)
- RSVP to peter.yim@cim3.com appreciated. (2GQJ)
- This session, like all other Ontolog events, is open to the public. Information relating to this session is shared on this wiki page: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2010_09_03 (2GQK)
- Please note that this session will be recorded, and the audio archive is expected to be made available as open content to our community membership and the public at-large under our prevailing open IPR policy. (2GQL)
Attendees: (2GQM)
- Attended: (2GQN)
- Expecting: (2GQP)
- MichaelGruninger (co-chair) (2GQQ)
- ToddSchneider (co-chair) (2GQR)
- MikeDean (2GQS)
- NatashaNoy (2GQT)
- KenBaclawski (2GQU)
- AlexGarcia (2GQV)
- JohnBateman (2GQW)
- PeterYim (2GQX)
- (2GQY)
- ... if you are coming to the session, please add your name above (plus your affiliation, if you aren't already a member of the community) above; or e-mail <peter.yim@cim3.com> so that we can reserve enough resources to support everyone's participation. ... (2GQZ)
- Regrets: (2GR0)
Resources (2GR1)
- OpenOntologyRepository - Homepage for the OOR initiative (2GR2)
- A recent presentation on OOR - OOR Presentation at SemTech2010 (2GSX)
- The OOR-sandbox v2.5 (powered by the NCBO BioPortal Core v2.5) instance, now online at: http://oor-01.cim3.net ref. (2GSY)
- OOR Project site and code repository at SemWebCentral - http://oor.semwebcentral.org (2GSZ)
- 2009_07_30 - Thursday: Joint Ontolog-OOR Panel Discussion: "BioPortal and related Ontology Repository Implementations and Development" (Take-3) - Chair: NatashaNoy - Panelists: CarlosRueda, PaulAlexander, JohnGraybeal, MikeDean, StephenGranite, AlexGarcia, KenBaclawski - ConferenceCall_2009_07_30 T (2GR5)
- 2009_02_19 - Thursday: Joint Ontolog-OOR Panel Discussion: "Getting OOR Development Off the Ground (Take-2): the work begins" - Chair: ToddSchneider; Panelists: MarkMusen, NatashaNoy, MikeDean, PaulBuitelaar / AndreasHarth, MathieuDaquin, KenBaclawski, MichaelGruninger - ConferenceCall_2009_02_19 T (2GR6)
- 2008_08_22 - Friday: OOR Panel Discussion: "Getting OOR Development Off the Ground: Identifying Synergies & Gaps" (Take-1) - Chair: LeoObrst; Panelists: MikeDean, MarkMusen, LiDing, BruceBargmeyer & BillAndersen - ConferenceCall_2008_08_22 T (2GR7)
- 2008_04_29 - Our team made a presentation with our history, status, OOR rationale and requirements, and a proposed roadmap at the OntologySummit2008 - see: http://ontolog.cim3.net/cgi-bin/wiki.pl?OntologySummit2008/FaceToFaceAgenda#nid1BLS (2GR8)
- OntologySummit2008_Communique (2GR9)
- our last regular OOR-team meeting - OOR/ConferenceCall_2010_08_20 (2GRA)
- [ oor-forum ] message archive - http://ontolog.cim3.net/forum/oor-forum/ (2GRB)
- (if you are not yet subscribed) you may subscribe yourself to the [ oor-forum ] listserv, by sending a blank email to <oor-forum-join [at] ontolog.cim3.net> from your subscribing email address, and then follow the instructions you receive back from the mailing list system. (2GRC)
- check out our other mailing lists and join us (2GRD)
Agenda & Proceedings: (2GRE)
Session Topic: "Getting OOR Development Going - Take-IV" (2GRF)
- Session Format & Agenda: this is a virtual session conducted over an augmented conference call: (2GRG)
- 1. Opening - co-chairs ... [ slides ] (2GRH)
- 2. Panelists presentations - MikeDean, NatashaNoy, KenBaclawski, AlexGarcia, JohnBateman, MichaelGruninger (15 min. each) (2GRI)
- 3. Q & A and open discussion - All (30 min.) ... please refer to [ process above] (2GRJ)
- 4. Conclusion / Follow-up - co-chairs (2GRK)
Abstracts: (2GRL)
- Workshop Topic: "Getting OOR Development Going - Take-IV" (2GRM)
This session is sometimes referred to as the "fork" session. The key issue being addressed at this virtual workshop session (as the new OOR code repository at http://oor.semwebcentral.org emerges) is on how we should manage to incorporate various ongoing OOR-related software development efforts, and how best to "fork" from the BioPortal codebase while staying synergistic. (2GRO)
Figure 1: A Concept Map on OOR Development (2GRP)
Panel Member Talks: (2GRS)
Abstract: ... (coming!) (2GRV)
- Title: BioPortal and the OOR Fork (2GRW)
- by NatashaNoy (2GRX)
Abstract: ... (coming!) (2GRY)
- Title: Using WADL and WSDL for OOR services (2GRZ)
Abstract: ... (coming!) (2GS1)
- Title: The ORATE Contribution (2GS2)
- by AlexGarcia (2GS3)
Abstract: ... (coming!) (2GS4)
Abstract: ... (coming!) (2GS7)
- Title: The COLORE Contribution (2GS8)
Abstract: ... (coming!) (2GSA)
Transcript of the online chat during the session: (2GSB)
see raw transcript [ here]. (2GSC)
(for better clarity, the version below is a [ re-organized and lightly edited chat-transcript].) Participants are welcome to make light edits to their own contributions as they see fit. (2GSD)
-- begin of chat session -- (2GSE)
-- end of chat session -- (2GSF)
- Further Question & Remarks - please post them to the [ oor-forum ] listserv (2GSG)
- if you are already subscribed, post to <oor-forum [at] ontolog.cim3.net> (2GSH)
- (if you are not yet subscribed) you may subscribe yourself to the [ oor-forum ] listserv listserv, by sending a blank email to <oor-forum-join [at] ontolog.cim3.net> from your subscribing email address, and then follow the instructions you receive back from the mailing list system. (2GSI)
Audio Recording of this Session (2GSJ)
- To download the [ audio recording of the session], click [ here] (2GSK)
- the playback of the audio files require the proper setup, and an MP3 compatible player on your computer. (2GSL)
- Conference Date and Time: 03-Sep-2010 10:38am ~ ___pm Pacific Daylight Time (2GSM)
- Duration of Recording: _ Hour __ Minutes (2GSN)
- Recording File Size: ___ MB (in mp3 format) (2GSO)
- suggestion: its best that you listen to the session while having the presentation opened in front of you. You'll be prompted to advance slides by the speaker. (2GSP)
- Take a look, also, at the rich body of knowledge that this community has built together, over the years, by going through the archives of noteworthy past Ontolog events. (References on how to subscribe to our podcast can also be found there.) (2GSQ)
For the record ... (2GSR)
How To Join (while the session is in progress) (2GSS)
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- or, 3.1 access our shared-screen vnc server, if you are not behind a corporate firewall (2GSW)