OOR/ConferenceCall 2013 09 10

OpenOntologyRepository: "OOR-Ontohub-Gatekeeper API" Hackathon Session - IV - Tue 2013_09_10    (3WUE)

Session Topic: OOR-Ontohub-Gatekeeper API Hackathon-IV - Alignment    (3WUF)

Session Co-chairs: KenBaclawski & TillMossakowski    (3WUG)

This is the 4th session in a series of regular activities for the OOR team. The plan is to devote one meeting a month to intense coding (or other low level development) work.    (3WUH)

Conference Call Details:    (3WUI)

• Date: Tuesday, 10-Sep-2013    (3WUJ)
• Start Time: 7:00am PDT / 10:00am EDT / 4:00pm CEST / 3:00pm BST / 1400 UTC    (3WUK)
  • ref: World Clock    (3WUL)
• Expected Call Duration: 1.5~2.0 hours    (3WUM)

• Dial-in:    (3WUN)
  • Phone (US): +1 (206) 402-0100 ... (long distance cost may apply)    (3WUO)
    • ... [ backup nbr: (415) 671-4335 ]    (3WUP)
    • when prompted enter Conference ID: 141184#    (3WUQ)
  • Skype: joinconference (i.e. make a skype call to the contact with skypeID="joinconference") ... (generally free-of-charge, when connecting from your computer ... ref.)    (3WUR)
    • when prompted enter Conference ID: 141184#    (3WUS)
    • Unfamiliar with how to do this on Skype? ...    (3WUT)
      • Add the contact "joinconference" to your skype contact list first. To participate in the teleconference, make a skype call to "joinconference", then open the dial pad (see platform-specific instructions below) and enter the Conference ID: 141184# when prompted.    (3WUU)
    • Can't find Skype Dial pad? ...    (3WUV)
      • for Windows Skype users: Can't find Skype Dial pad? ... it's under the "Call" dropdown menu as "Show Dial pad"    (3WUW)
      • for Linux Skype users: please note that the dial-pad is only available on v4.1 (or later; or on the earlier Skype versions 2.x,) if the dialpad button is not shown in the call window you need to press the "d" hotkey to enable it. ... (ref.)    (3WUX)

• Discussions and Q & A:    (3WUY)
  • Nominally, when a presentation is in progress, the moderator will mute everyone, except for the speaker.    (3WUZ)
  • To un-mute, press "*7" ... To mute, press "*6" (please mute your phone, especially if you are in a noisy surrounding, or if you are introducing noise, echoes, etc. into the conference line.)    (3WV0)
  • we will usually save all questions and discussions till after all presentations are through. You are encouraged to jot down questions onto the chat-area in the mean time (that way, they get documented; and you might even get some answers in the interim, through the chat.)    (3WV1)
  • During the Q&A / discussion segment (when everyone is muted), If you want to speak or have questions or remarks to make, please raise your hand (virtually) by clicking on the "hand button" (lower right) on the chat session page. You may speak when acknowledged by the session moderator (again, press "*7" on your phone to un-mute). Test your voice and introduce yourself first before proceeding with your remarks, please. (Please remember to click on the "hand button" again (to lower your hand) and press "*6" on your phone to mute yourself after you are done speaking.)    (3WV2)

• In-session chat-room url: http://webconf.soaphub.org/conf/room/oor_20130910    (3WV3)
  • instructions: once you got access to the page, click on the "settings" button, and identify yourself (by modifying the Name field from "anonymous" to your real name, like "JaneDoe").    (3WV4)
  • You can indicate that you want to ask a question verbally by clicking on the "hand" button, and wait for the moderator to call on you; or, type and send your question into the chat window at the bottom of the screen.    (3WV5)
  • thanks to the soaphub.org folks, one can now use a jabber/xmpp client (e.g. gtalk) to join this chatroom. Just add the room as a buddy - (in our case here) oor_20130910@soaphub.org ... Handy for mobile devices!    (3WV6)

• Shared-screen support (VNC session), if applicable, will be started 5 minutes before the call at: http://vnc2.cim3.net:5800/    (3WV7)
  • view-only password: "ontolog"    (3WV8)
  • if you plan to be logging into this shared-screen option (which the speaker may be navigating), and you are not familiar with the process, please try to call in 5 minutes before the start of the session so that we can work out the connection logistics. Help on this will generally not be available once the presentation starts.    (3WV9)
  • people behind corporate firewalls may have difficulty accessing this. If that is the case, please download the [ slides] (where applicable) and running them locally. The speaker(s) will prompt you to advance the slides during the talk.    (3WVA)

• Please review our Virtual Session Tips and Ground Rules - see: VirtualSpeakerSessionTips    (3WVB)

• RSVP to peter.yim@cim3.com appreciated, ... or simply just by adding yourself to the "Expected Attendee" list below (if you are a member of the team.)    (3WVC)

• This session, like all other Ontolog events, is open to the public. Information relating to this session is shared on this wiki page: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_09_10    (3WVD)

• Please note that this session may be recorded, and if so, the audio archive is expected to be made available as open content, along with the proceedings of the call to our community membership and the public at-large under our prevailing open IPR policy.    (3WVE)

Attendees:    (3WVF)

• Attended:    (3WVG)
  • KenBaclawski (co-chair)    (3WVI)
  • TillMossakowski (co-chair)    (3WVJ)
  • PeterYim    (3WVK)
  • MichaelGruninger    (3XAZ)
  • BobSmith    (3X8W)
  • DanielCoutoVale    (3XB4)

• Expecting:    (3WVH)
  • ...    (3WVL)
•    (3WVM)
  • (please add yourself to the list above if you are a member of the community, or, rsvp to <peter.yim@cim3.com> with the event title/date and your name and affiliation)    (3WVN)

• Regrets:    (3WVO)
  • ToddSchneider    (3WVP)

Agenda Ideas    (3WVQ)

• review and finish defining the OOR-Ontohub-Gatekeeper API    (3WVR)
• discussion, deliberation and implement features addressing alignment issues    (3WVS)
• set deliverables, due dates and follow-up action plans    (3WVT)
• ... (add yours)    (3WVU)
• ... KenBaclawski & TillMossakowski will be providing further details    (3WVV)

In-session Resources    (3WVW)

• Current Ontohub-OOR-Gatekeeper API specified in IDL 3.5    (3WW6)
  • other related API's (from this effort) Ontohub-OOR API code repository on github    (3WW5)
  • Ontohub-OOR API working document (google-doc) ...    (3WW7)
  • Ontohub-OOR API as google-docs - http://tinyurl.com/onto-arch or    (3WW8)
    • Ontohub-OOR API (updated snapshot from ? OntologySummit2013_Hackathon_Clinics_Ontohub_OOR_OOPS_Integration HC-07) - http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/OOR-Ontohub-API_wip-snapshot_20130430c.pdf (ref.)    (3WW9)
  • OOR-Ontohub API module on github - https://github.com/ontohub/OOR_Ontohub_API/blob/master/ontology.idl    (3WWA)
  • OOR-Gatekeeper API module on github - https://github.com/ontohub/OOR_Ontohub_API/blob/master/gatekeeper.idl    (3WWB)
• Ontohub-OOR API working document (google-doc) - http://tinyurl.com/onto-arch    (3WVX)
  • 2013.06.25 end-of-session OOR-API working document snapshot    (3WVY)
  • Ontohub-OOR API (updated snapshot from HC-07) - http://ontolog.cim3.net/file/work/OpenOntologyRepository/OOR-Architecture/OOR-API/OOR-Ontohub-API_wip-snapshot_20130430c.pdf (ref.)    (3WVZ)
• OOR-Keeper Integration Hackathon Proposal    (3WW0)

Agenda & Proceedings    (3WWE)

Archives:    (3WWF)

• Ontohub-OOR API working document ...    (3WWG)
  • OOR-Ontohub API module on github - https://github.com/ontohub/OOR_Ontohub_API/blob/master/src/Ontology.idl    (3WWI)
  • Ontohub-OOR API as google-docs    (3WWH)

• audio recording of the session ... [ 1:00:59 ; mp3 ; 6.98 MB ]    (3WWK)
• chat-transcript of this session    (3WWL)

1. Meeting called to order:    (3WWM)

• KenBaclawski & TillMossakowski took the chair and welcome everyone    (3WWN)
• PeterYim volunteered to collate the notes, but urged everyone to capture their thoughts and document them on the chat board, as usual.    (3WWO)
• review and adopt agenda    (3WWP)

• Urgent items or quick announcements    (3WWQ)

2. Roll Call:    (3WWR)

• see above    (3WWS)

• welcome and intro of new member(s) (if applicable)    (3WWT)

3. Key discussion:    (3WWU)

3.1 Review of previous meetings' decision and action items    (3WWV)

• Please refer to details at the previous hackathon sessions (I, II & III) below:    (3WWC)
  • in plarticular, please refer to details at the previous hackathon session (which this is a continuation of) - OOR Hackathon-III: The "OOR-Ontohub-Gatekeeper API" Hackathon Session - Co-chairs: TillMossakowski & KenBaclawski - OOR/ConferenceCall_2013_07_30    (3WW1)

3.2 work for this hackathon session    (3WX0)

• review and finish defining the OOR-Ontohub-Gatekeeper API    (3WX1)
• discussion, deliberation and implement features addressing alignment issues    (3WX2)
• set deliverables, due dates and follow-up action plans    (3WX3)
• ... KenBaclawski & TillMossakowski will be providing further details    (3WX4)

4. Prior Discussions: ... for reference only!    (3WX5)

4.1 Discussion: tactically, what shall we be doing differently in the next 6 to 12 months    (3WX6)

• Focused discussion on the tactics and action plans that will help put the recently refined OOR Strategy in place    (3WX7)
  • explore how we might possibly leverage    (3WX8)
    • (i) the OntologyBasedStandards initiative, and    (3WX9)
    • (ii) IAOA,    (3WXA)
    • (iii) OntologySummit2014    (3WXB)
    • (iv) upcoming mini-series on "Ontology-Rules-Reasoning-LogicProgramming-Applications" ... to provide synergies for all - please join this Thursday's ONTOLOG Community Planning Session: Event Scheduling for the Rest of 2013: ConferenceCall_2013_09_12    (3WXC)

4.2 Setting the metrics - what does "success" look like    (3WXD)

4.3 Action planning for "content drive" (getting people to upload ontologies) ... (deferred discussion of this item)    (3WXE)

• (discussion 2011.05.06):    (3WXF)
  • an adopted Architecture & API is definitely crucial, but that's not all    (3WXG)
• All team members are encouraged to mull over how we can get to that state effectively    (3WXH)
  • in particular ... how do we make this a "successful" community-driven, open source project!?    (3WXI)
• (discussion 2011.08.07)'' ...    (3WXJ)
  • ref. IAOA Committee and SIG session at FOIS (2012.07.25) discussion:    (3WXK)
    • IAOA Ontology Registry and Repository Committee to put focus on contents    (3WXL)
    • getting FOIS papers to be submitted with cited ontologies and their metadata, and have those ontologies hosted on OOR    (3WXM)

• 4.4 Coordination for getting work funded    (3WXN)
  • ref. "opportunities"    (3WXO)
    • http://ontolog.cim3.net/forum/ontolog-forum/2012-07/msg00057.html    (3WXP)
    • http://ontolog.cim3.net/forum/ontolog-forum/2012-04/msg00028.html#nid04    (3WXQ)
  • we will tackle this in the upcoming "dedicated" session, where we will start by strategizing how we might proceed ... ref above.    (3WXR)

• 4.5 OOR instances OOR: status update and coordination ... (deferred discussion of this item)    (3WXS)
• OOR: sandbox, devbox, test-instance, socop, colore, ontohub, ornl-daac, mmi-orr, new ncbo-appliance, ... status update and coordination    (3WXT)
  • updated OOR index page - http://oor.net - opens to the index page for accessing any of the OOR instances; takes one to the OOR project homepage after 15 seconds ... now with a "pause button"    (3WXU)
  • OOR project homepage - http://www.oor.net - opens to the OOR project homepage on this wiki (same effect as http://OpenOntologyRepository.org or http://oor.cim3.net)    (3WXV)
  • servers/instances:    (3WXW)
  • OOR-01 - (old instance, being retired) re-direct to project homepage    (3WXX)
  • OOR-02 - ci server    (3WXY)
  • OOR-03 - sandbox - http://sandbox.oor.net    (3WXZ)
  • OOR-04 - socop - http://socop.oor.net    (3WY0)
  • OOR-05 - devbox - http://dev.oor.net    (3WY1)
  • OOR-06 - test-00 - http://test-00.oor.net    (3WY2)
  • status review ...    (3WY3)

• 4.6 Getting us to a stage when we can run a OOR-production box ... (deferred discussion of this item)    (3WY4)
  • we need a gatekeeping/policy module in place - [KenBaclawski]    (3WY5)

• 4.7 Renewed OOR tactics (as agreed during the 2013.06.18 meeting) - there is general consensus we would change to a more bottom-up approach (rather than the "top-down" approach we have been taking ...    (3WY6)
  • we will allow each oor node project to develop (colore, ontohub, socop, oor public instance, etc.) on their own, and coordinate the "team" effort through the use of a shared set of metadata, API and the UI (e.g. how people download (or even upload) ontologies, etc.)    (3WY7)
  • The key is to ensure that each of the ontology repository projects in OOR are interoperable from the software perspective, uniform in the GUI, and they use a shared approach to ontology metadata    (3WY8)
  • we will make oor.net to be an ontology registry, which then links to the ontologies in the actual ontology repository where the ontology is described    (3WY9)
  • actions will be focused on developing three things (hopefully within the next 3 months): the set of metadata, the API, and some shared thoughts on the UI    (3WYA)
  • after that, we will focus on building up content with each OOR node tackling the domain(s) they are best with    (3WYB)

5. IM Chat Transcript captured during the session:    (3WYC)

 see raw transcript here.    (3WYD)

 (for better clarity, the version below is a re-organized and lightly edited chat-transcript.)
 Participants are welcome to make light edits to their own contributions as they see fit.    (3WYE)

 -- begin in-session chat-transcript --    (3WYF)

 	------
	Chat transcript from room: oor_20130910
	2013-09-10 GMT-08:00
	------    (3WYG)

	[6:53] PeterYim: Welcome to the    (3XB5)

	 = OpenOntologyRepository: "OOR-Ontohub-Gatekeeper API" Hackathon Session - Tue 2013_09_10 =    (3XB6)

	Session Topic: OOR-Ontohub-Gatekeeper API Hackathon-IV - Alignment    (3XB7)

	Session Co-chairs: KenBaclawski & TillMossakowski    (3XB8)

	This is the 4th of the series of regular activities for the OOR team. The plan is to devote one meeting a month to 
        intense coding (or other low level development) work.    (3XB9)

	session page: http://ontolog.cim3.net/cgi-bin/wiki.pl?OOR/ConferenceCall_2013_09_10    (3XBA)

	Attendees: KenBaclawski (co-chair), TillMossakowski (co-chair), BobSmith, MichaelGruninger, PeterYim (scribe), DanielCoutoVale.    (3XBB)

	 == Proceedings ==    (3XBC)

	[7:06] PeterYim: == session starts ...    (3XBD)

	[7:06] List of members: BobSmith, KenBaclawski, MichaelGruninger, PeterYim, TillMossakowski    (3XBE)

	[7:07] PeterYim: Till: updated/current version of API (by Daniel) is at: https://github.com/ontohub/OOR_Ontohub_API/commits/master/src/Ontology.idl    (3XBF)

	[7:09] PeterYim: Till showed us how to do a diff on github: just goto History, then click on the hexadecimal version-ID    (3XBG)

	[7:15] PeterYim: from the source comments: # TODO: also include the gatekeeper API, BUT: users should have access to repositories (not ontologies - they belong to repositories)    (3XBH)

	[7:16] PeterYim: Till / Peter: hopefully, this "Alignment" exercise is our last (OOR) internal step before we are in 
        a position to "publish" this API to the broader ontology community    (3XBI)

	[7:20] KenBaclawski: The Item in gatekeeper should be changed to Repository to make it consistent with the Ontology.idl.    (3XBJ)

	[7:21] TillMossakowski: ... and then it can be imported in Ontology.idl    (3XBK)

	[7:21] PeterYim: ref. BioPortal Interface Tier - see: http://ontolog.cim3.net/cgi-bin/wiki.pl?OpenOntologyRepository_Architecture/From_BioPortal#nid2MT0    (3XBL)

	[7:22] PeterYim: Question: are we handling access control and authentication via the Gatekeeper or via the BioPortal interface?    (3XBM)

	[7:24] KenBaclawski: The gatekeeper.idl is not concerned with access control and authentication but rather with 
        roles and responsibilities of a user.    (3XBN)

	[7:53] PeterYim: Till: github is closed sourced    (3XBO)

	[8:00] MichaelGruninger: I need to leave now -- sorry, I double-booked meetings    (3XBP)

	[8:00] PeterYim: bye, Michael!    (3XBQ)

	[8:03] KenBaclawski: I will send the existing gatekeeper prototype to Till.  It is based on existing business process software. 
        I also have a paper that explains the gatekeeper.  Unfortunately, I was unable to modify the gatekeeper so that it could be 
        integrated with the OOR.    (3XBR)

	[8:05] KenBaclawski: We will look for existing software that could be used for gatekeeping/workflow.    (3XBS)

	[8:08] DanielCoutoVale: I'm connecting to the conference now! Need to make contact with Ken ref. preparation of the Sep-17 session    (3XBT)

	[8:10] PeterYim: Hi Daniel ... we are about done NOW    (3XBU)

	[8:11] KenBaclawski: My email is Ken [at] Baclawski.com    (3XBV)

	[8:14] PeterYim: next hackethon session will be on Oct-15 - OOR Hackathon n.05 Tue 2013.10.15 ... (there is a possibility that
        Till will be teaching at this hour; if so, we will consider moving the regular Tuesday OOR confcall time to accommodate it.)    (3XBW)

	[8:14] PeterYim: -- session ended: 8:12am PDT --    (3XBX)

 -- end in-session chat-transcript --    (3WYH)

6. Action items:    (3WYI)

• (see above)    (3WYJ)

7. Any Other Business: ... (deferred to the next meeting)    (3WYK)

• we have decided to host a community session to collect input, discuss, and gain consensus on the approach towards the "Meta-Ontology for Ontology Categories" - this is now scheduled for Tue 2013.10.08 - start-time: 7:00am PDT / 10:00am EDT / 4:00pm CEST / 3:00pm BST / 1400 UTC    (3WYL)
  • we hope stewards of current and developing ontology repositories (folks from BioPortal, SOCoP-OOR, COLORE, Ontohub, and various OOR nodes ... and other domain ontology repositories, like, for Standards, space-portal, etc. )    (3WYM)

8. Schedule Next Meeting & Adjourn:    (3WYN)

• next Meeting - Tue 2013.09.17 - OOR Common UI - chair: KenBaclawski ... with opening brief from DanielCouteVale    (3WYP)
• after that we'll have ...    (3WYQ)
  • Tue 2013.10.01 - regular (monthly) OOR Team planning & admin meeting    (3WYR)
  • Tue 2013.10.08 - "Meta-Ontology for Ontology Categories" - co-chairs: TillMossakowski & MichaelGruninger    (3X2H)
    • ... We hope stewards of current and developing ontology repositories (folks from BioPortal, SOCoP-OOR, COLORE, Ontohub, and various OOR nodes ... and other domain ontology repositories, like, for Standards, SpacePortal, Financial Industry, etc.) will join us in this session, share their thoughts and help develop a consensus.    (3X2I)
• please also join this Thursday's ONTOLOG Community Planning Session: Event Scheduling for the Rest of 2013: ConferenceCall_2013_09_12    (3X2J)
• regular meeting start-times will be: 7:00am PDT / 10:00am EDT / 4:00pm CEST / 3:00pm BST / 1400 UTC    (3WYS)
• 1st Tuesdays of each month will be for OOR team regular monthly confcall - for admin/planning    (3WYT)
• 2nd Tuesdays of each month will be for OOR-hackathon    (3WYU)
• ... please mark your calendars and make sure you can come!    (3WYV)

• Call adjourned at: 8:12 am PDT    (3WYW)

 --
 notes taken by: PeterYim / 2013.09.10-11:26am PDT
 All participants, please review and edit to enhance accuracy and granularity of the documented proceedings.    (3WYX)

---

Resources    (3WYY)

• Homepage for the Open Ontology Repository Initiative - OpenOntologyRepository - http://OpenOntologyRepository.org or simply http://www.oor.net    (3WYZ)
• OOR Charter - To promote the global use and sharing of ontologies by:    (3WZ0)
  • 1. establishing a hosted registry-repository;    (3WZ1)
  • 2. enabling and facilitating open, federated, collaborative ontology repositories;    (3WZ2)
  • 3. establishing best practices for expressing interoperable ontology and taxonomy work in registry-repositories.    (3WZ3)
• "Ontology Repository" Definition - "An ontology repository is a facility where ontologies and related information artifacts can be stored, retrieved and managed"    (3WZ4)
• Team mailing list:    (3WZ5)
  • OOR-Team discussion: [ oor-forum ] message archives - http://ontolog.cim3.net/forum/oor-forum/    (3WZ6)
  • OOR-Users discussion and support: [ oor-users ] message archives - http://ontolog.cim3.net/forum/oor-users/    (3WZ7)
  • Developers mailing list: [ oor-dev ] message archives - http://ontolog.cim3.net/forum/oor-dev/    (3WZ8)
• proceedings of our previous meetings, panel discussions and workshops    (3WZ9)

• the Joint OOR-OntologySummit2008 Panel Discussions:    (3WZA)
  • 2008_02_28 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Ontology Registry and Repository Technology & Infrastructure Landscape" - Co-chairs: LeoObrst & FrankOlken; Panelists: BruceBargmeyer, MikeDean, MarkMusen, FarrukhNajmi & PeterYim - ConferenceCall_2008_02_28    (3WZB)
  • 2008_03_27 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-1" - Chair: LeoObrst & FabianNeuhaus; Panelists: WilliamBug, EvanWallace, JohnLMcCarthy, KenBaclawski, PeterBenson & RexBrooks - ConferenceCall_2008_03_27    (3WZC)
  • 2008_04_03 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "An Open Ontology Repository: Rationale, Expectations & Requirements - Session-2" - Chair: LeoObrst & FabianNeuhaus; Panelists: DougLenat, DekeSmith, MarciaZeng, DeniseBedford, PatHayes, MalaMehrotra & RobRaskin - ConferenceCall_2008_04_03    (3WZD)
  • 2008_04_10 - Thursday: Joint OOR-OntologySummit2008 Panel Discussion: "Developing an Ontology of Ontologies for OOR" - Co-chairs: BarrySmith & MichaelGruninger; Panelists: MichaelGruninger, PeterHaase, NatashaNoy & ElisaKendall - ConferenceCall_2008_04_10    (3WZE)

• the OOR Development panel sessions:    (3WZF)
  • 2008_08_22 - Friday: OOR Panel Discussion: "Getting OOR Development Off the Ground: Identifying Synergies & Gaps" (Take-1) - Chair: LeoObrst; Panelists: MikeDean, MarkMusen, LiDing, BruceBargmeyer & BillAndersen - ConferenceCall_2008_08_22    (3WZG)
  • 2009_02_19 - Thursday: Joint Ontolog-OOR Panel Discussion: "Getting OOR Development Off the Ground (Take-2): the work begins" - Chair: ToddSchneider; Panelists: MarkMusen, NatashaNoy, MikeDean, PaulBuitelaar / AndreasHarth, MathieuDaquin, KenBaclawski, MichaelGruninger - ConferenceCall_2009_02_19    (3WZH)
  • 2009_07_16 - Thursday: Joint Ontolog-OOR Panel Discussion: "Integrated tools for ontology development and management: A field guide to the Stanford technology" - Chair: MarkMusen - Panelists: TaniaTudorache, TimRedmond, NatashaNoy - ConferenceCall_2009_07_16    (3WZI)
  • 2009_07_30 - Thursday: Joint Ontolog-OOR Panel Discussion: "BioPortal and related Ontology Repository Implementations and Development" (Take-3) - Chair: NatashaNoy - Panelists: CarlosRueda, PaulAlexander, JohnGraybeal, MikeDean, StephenGranite, AlexGarcia, KenBaclawski - ConferenceCall_2009_07_30    (3WZJ)
  • 2010_02_19 - Friday: OOR Panel Discussion: "Coordinating our Open Ontology Repository Software Development" - Chair: MikeDean - Panelists: JimChatigny, MichaelGruninger, KenBaclawski, NatashaNoy - OOR/ConferenceCall_2010_02_19    (3WZK)
  • 2010_04_01 - Thursday: Joint OOR-Ontolog Panel Session: "OOR Use Cases - Take-3" - Chair: KenBaclawski & ToddSchneider - Panelists: ToddSchneider, MatthewHettinger, KenBaclawski and MaximoGurmendez - ConferenceCall_2010_04_01    (3WZL)
  • 2010_09_10 - Friday: Joint SIO-OOR-Ontolog Panel Discussion: "Common Logic (CL) Support for OOR" - Chair: JohnSowa - Panelists: JohnBateman-TillMossakowski, MichaelGruninger, CameronRoss, AdamPease, PatHayes - ConferenceCall_2010_09_10    (3WZM)
  • 2010_09_17 - Friday: OOR Panel Discussion - "Getting OOR Development Going - Take-IV" Workshop - Co-chairs: ToddSchneider & MichaelGruninger - Panelists: ToddSchneider, MikeDean, NatashaNoy, ImmanuelNormann, KenBaclawski, MichaelGruninger - OOR/ConferenceCall_2010_09_17    (3WZN)

•    (3WZO)
  • 2010_10_15 - Friday: OOR Project Team Member Conference Call - discussion on the (post-BioPortal fork) OOR Architecture and API - OOR/ConferenceCall_2010_10_15    (3WZP)
  • 2011_09_13 - Tuesday: Joint NCBO-OOR Team Meeting - "Kicking-off the Next Phase of Collaboration" - Co-chairs: RayFergerson & PeterYim - OOR/ConferenceCall_2011_09_13    (3WZQ)
  • 2011_11_29 - Tuesday: Joint NCBO-OOR Session - "OOR Architecture & API Workshop-IX: BioPortal & OOR Synergies" - Co-chairs: KenBaclawski & ToddSchneider - Discussant: RayFergerson - OOR/ConferenceCall_2011_11_29    (3WZR)
  • 2012_03_27 - Tuesday: OOR presentation: "Ontohub: an OOR-compliant Repository for Distributed Ontologies" - Chair: TillMossakowski - OOR/ConferenceCall_2012_03_27    (3WZS)

• OOR Architecture & API Workshops:    (3WZT)
  • 2010_11_19 - Friday: OOR Panel Discussion - "(Post-BioPortal fork) OOR Architecture and API - Take-II" - Co-chairs: KenBaclawski & MichaelGruninger - Panelists: KenBaclawski+ToddSchneider, AldoGangemi+AlessandroAdamou, JouniTuominen+KimViljanen, EricChan - OOR/ConferenceCall_2010_11_19    (3WZU)
  • 2011_03_04 - Friday: OOR "Architecture & API Specification Development Workshop-I" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_03_04    (3WZV)
  • 2011_03_11 - Friday: OOR - "Architecture & API Specification Development Workshop-II" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_03_11    (3WZW)
  • 2011_03_25 - Friday: OOR - "Architecture & API Specification Development Workshop-III" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_03_25    (3WZX)
  • 2011_04_22 - Friday: OOR - "Architecture & API Specification Development Workshop-IV" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_04_22    (3WZY)
  • 2011_05_20 - Friday: OOR - "Architecture & API Specification Development Workshop-V" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_05_20    (3WZZ)
  • 2011_06_17 - Friday: OOR - "Architecture & API Specification Development Workshop-VI" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_06_17    (3X00)
  • 2011_09_20 - Tuesday: OOR - "Architecture & API Specification Development Workshop-VII" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_09_20    (3X01)
  • 2011_10_11 - Tuesday: OOR - "Architecture & API Specification Development Workshop-VIII" - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2011_10_11    (3X02)
  • 2012_01_31 - Tuesday: OOR - "Architecture & API Workshop-X" - Co-chairs: ToddSchneider & KenBaclawski - OOR/ConferenceCall_2012_01_31    (3X03)
  • 2012_03_20 - Tuesday: OOR - "Architecture & API Workshop-XI" - Co-chairs: ToddSchneider & KenBaclawski - OOR/ConferenceCall_2012_03_20    (3X04)
  • 2012_05_08 - Tuesday: OOR - "Architecture & API Workshop-XII" - Co-chairs: ToddSchneider & KenBaclawski - OOR/ConferenceCall_2012_05_08    (3X05)
  • 2012_09_11 - Tuesday: "OOR Architecture & API Workshop-XIII" (a.k.a. "OOR Use Cases - Take-4") - Co-chairs: KenBaclawski & ToddSchneider - OOR/ConferenceCall_2012_09_11    (3X06)

• OOR Code Development Workshops:    (3X07)
  • 2011_11_08 - Tuesday: "Getting OOR Development Going - Take-V" Workshop - Chair: MikeDean - "Getting OOR Development going, on Eclipse?" - OOR/ConferenceCall_2011_11_08    (3X08)
  • 2011_11_22 - Tuesday: "Getting OOR Development Going - Take-VI" Workshop - Chair: MikeDean - OOR/ConferenceCall_2011_11_22    (3X09)
  • 2012_02_28 - Tuesday: "Getting OOR Development Going - Take-VII" Workshop - Chair: KenBaclawski - OOR/ConferenceCall_2012_02_28    (3X0A)
  • 2012_05_22 - Tuesday: "Getting OOR Development Going - Take-VIII" Workshop - Chair: MikeDean - OOR/ConferenceCall_2012_05_22    (3X0B)

• the OOR Hackathon Sessions:    (3X0C)
  • 2013_06_25 - Tuesday: OOR Hackathon-I: The "OOR-Ontohub-Gatekeeper API-1" Hackathon Session - Co-chairs: TillMossakowski & KenBaclawski - OOR/ConferenceCall_2013_06_25    (3X0D)
  • 2013_07_16 - Tuesday: OOR Hackathon-II: The "OOR-Ontohub-Gatekeeper API-2" Hackathon Session - Co-chairs: KenBaclawski & TillMossakowski - OOR/ConferenceCall_2013_07_16    (3X0E)
  • 2013_07_30 - Tuesday: OOR Hackathon-III: The "OOR-Ontohub-Gatekeeper API-3" Hackathon Session - Co-chairs: KenBaclawski & TillMossakowski - OOR/ConferenceCall_2013_07_30    (3X0F)
  • 2013_09_10 - Tuesday: OOR Hackathon-IV: The "OOR-Ontohub-Gatekeeper API-4" Hackathon Session - Co-chairs: KenBaclawski & TillMossakowski - OOR/ConferenceCall_2013_09_10    (3X0G)

• OOR Metadata Workshops:    (3X0H)
  • 2011_03_18 - Friday: OOR Metadata Workshop-I - Chair: MichaelGruninger - OOR/ConferenceCall_2011_03_18    (3X0I)
  • 2011_05_13 - Friday: OOR Metadata Workshop-II - Chair: MichaelGruninger - OOR/ConferenceCall_2011_05_13    (3X0J)
  • 2011_05_27 - Friday: OOR Metadata Workshop-III - Chair: MichaelGruninger - OOR/ConferenceCall_2011_05_27    (3X0K)
  • 2011_10_18 - Tuesday: OOR Metadata Workshop-IV - Chair: MichaelGruninger - OOR/ConferenceCall_2011_10_18    (3X0L)
  • 2012_01_17 - Tuesday: OOR Metadata Workshop-V - Chair: MichaelGruninger - OOR/ConferenceCall_2012_01_17    (3X0M)
  • 2012_03_06 - Tuesday: OOR Metadata Workshop-VI - Chair: MichaelGruninger - OOR/ConferenceCall_2012_03_06    (3X0N)
  • 2012_04_24 - Tuesday: OOR Metadata Workshop-VII - Chair: MichaelGruninger - OOR/ConferenceCall_2012_04_24    (3X0O)
  • 2013_07_02 - Tuesday: OOR Metadata Workshop-VIII - Co-chair: MichaelGruninger & MikeBennett - OOR/ConferenceCall_2013_07_02    (3X0P)

• the OOR Infrastructure workshops:    (3X0Q)
  • 2011_12_13 - Tuesday: OOR Infrastructure Workshop - Chair: PeterYim - OOR/ConferenceCall_2011_12_13    (3X0R)

• OOR Content Workshops:    (3X0S)
  • 2010_03_12 - Friday: OOR Content Workshop-I - Co-chairs: PatCassidy & DeniseBedford - OOR/ConferenceCall_2010_03_12    (3X0T)
  • 2012_05_22 - Tuesday: OOR Content Workshop-II - Chair: MichaelGruninger & MikeDean - OOR/ConferenceCall_2012_05_29    (3X0U)

• OOR for Big Data Workshops:    (3X0V)
  • 2012_08_14 - Tuesday: OOR for Big Data-I: Brainstorm Session - Chair: MikeDean - OOR/ConferenceCall_2012_08_14    (3X0W)

• the OOR Funding workshops:    (3X0X)
  • 2012_08_21 - Tuesday: OOR Funding-II: "Rethinking our Funding Strategy" Brainstorm Session - Chair: KenBaclawski - OOR/ConferenceCall_2012_08_21    (3X0Y)

• the OOR Strategy workshops:    (3X0Z)
  • 2012_11_06 - Tuesday: OOR Strategy (& Funding): "OOR Straetegy: a mini- Strategic Planning" Brainstorm Session - Co-chairs: PeterYim & KenBaclawski - OOR/ConferenceCall_2012_11_06    (3X10)
  • 2012_11_20 - Tuesday: OOR Strategy (& Funding): "OOR Straetegy: Tactics and Action Planning" Session - Co-chairs: PeterYim & KenBaclawski - OOR/ConferenceCall_2012_11_20    (3X11)
  • 2013_05_28 - Tuesday: OOR Strategy & Tactics: "Revisiting OOR Straetegy and Tactics - I" Session - Co-chairs: PeterYim & MikeDean - OOR/ConferenceCall_2013_05_28    (3X12)
  • 2013_06_18 - Tuesday: OOR Strategy & Tactics: "Revisiting OOR Straetegy and Tactics - II" Session - Chair: PeterYim - OOR/ConferenceCall_2013_06_18    (3X13)

• the Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series:    (3X14)
  • 2011_10_20 - Thursday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-1: Introducing the ISO NP 17347 "Ontology Integration and Interoperability (OntoIOp)" Standardization Effort - Co-chairs: JohnBateman & MichaelGruninger - ConferenceCall_2011_10_20    (3X15)
  • 2011_11_03 - Thursday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-2: Invited Speaker: ElisaKendall on "Ontology-Related Metadata Standards" - Co-chairs: MichaelGruninger & JohnBateman - ConferenceCall_2011_11_03    (3X16)
  • 2012_07_17 - Tuesday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-3: "Standardisation Coordination and Ontology Repositories" - Co-chairs: MichaelGruninger & JohnBateman - ConferenceCall_2012_07_17    (3X17)
  • 2012_09_20 - Thursday: Joint IAOA-OOR-Ontolog "Ontologies and Standards" mini-series session-4: "Common Logic" - Co-chairs: MichaelGruninger & JohnBateman - ConferenceCall_2012_09_20    (3X18)

• the Joint OASIS-OMG-ISO-IAOA-OOR-Ontolog "Ontology-based Standards" mini-series:    (3X19)
  • 2012_10_25 - Thursday: Joint OASIS-OMG-ISO-IAOA-OOR-Ontolog "Ontology-based Standards" mini-series session-1: Sharing Experiences-I - Co-chairs: ElisaKendall & PeterYim - Speakers: JamesStPierre, ChetEnsign, AndrewWatson, DeniseWarzel, MichaelGruninger, LeoObrst, KenBaclawski, EricChan - ConferenceCall_2012_10_25    (3X1A)
  • 2012_11_08 - Thursday: Joint OASIS-OMG-ISO-IAOA-OOR-Ontolog "Ontology-based Standards" mini-series session-2: Sharing Experiences-II - Co-chairs: MichaelGruninger & EricChan - Panelists: ElisaKendall, MarkLinehan, DavideSottara - ConferenceCall_2012_11_08    (3X1B)

• the OOR-IPR mini-series:    (3X1C)
  • 2010_09_09 - Thursday: Joint OOR-Ontolog-NCBO-CC-IAOA-OASIS Panel Discussion - "IPR issues in Ontology and the OOR" session-1: an exposition on relevant IPR regimes - Keynote speaker: GeorgeStrawn - Chair: PeterYim - Panelists: JamieClark, JohnWilbanks, BrucePerens - ConferenceCall_2010_09_09    (3X1D)
  • 2010_09_16 - Thursday: Joint OOR-Ontolog-NCBO-CC-IAOA-OASIS Panel Discussion - "IPR issues in Ontology and the OOR" session-2: what are the IPR issues relating to open ontology repositories (and ontologies in general)? - Chair: MarkMusen - Panelists: CameronRoss, AlanRector, JohnSowa, BrucePerens, JohnWilbanks, PeterYim - ConferenceCall_2010_09_16    (3X1E)
  • 2010_09_30 - Thursday: Joint OOR-Ontolog-NCBO-CC-IAOA-OASIS Panel Discussion - "IPR issues in Ontology and the OOR" session-3: discussion and consensus on licensing arrangements for the OOR Initiative, and positions we might take on related IPR issues - chair: LeoObrst - Panelists: PeterYim, MikeDean, BrucePerens, JamieClark - ConferenceCall_2010_09_30    (3X1F)

• OntologySummit2008 homepage    (3X1G)
  • OntologySummit2008_Communique    (3X1H)
  • OntologySummit2008/FaceToFaceAgenda & Proceedings    (3X1I)
  • The OOR Project Presentation (delivered at the OntologySummit2008 face-to-face workshop)    (3X1J)
• [ ontology-summit ] discussion archives - http://ontolog.cim3.net/forum/ontology-summit/2008-01/ (~5 months exchanges starting from Jan-2008)    (3X1K)
• Our key content pages:    (3X1L)
  • OpenOntologyRepository_Scope    (3X1M)
  • OpenOntologyRepository_Organization    (3X1N)
  • OpenOntologyRepository_Process    (3X1O)
  • OpenOntologyRepository_Policy    (3X1P)
  • OpenOntologyRepository_IPR    (3X1Q)
  • OpenOntologyRepository_Requirement    (3X1R)
  • OpenOntologyRepository_UseCases    (3X1S)
  • OpenOntologyRepository_Architecture    (3X1T)
  • OpenOntologyRepository_Approach    (3X1U)
  • OpenOntologyRepository_Roadmap    (3X1V)
  • OpenOntologyRepository_Plan    (3X1W)
  • OpenOntologyRepository_Funding    (3X1X)
  • OpenOntologyRepository_ResearchIssues    (3X1Y)
  • OpenOntologyRepository_ResearchActivity    (3X1Z)
  • OpenOntologyRepository_Development    (3X20)
  • OpenOntologyRepository_Metadata    (3X21)
• OOR/ActiveMemberContribution    (3X22)
• OOR Project site at SemWebCentral - http://oor.semwebcentral.org    (3X23)
• Public instances of OOR - http://oor.net    (3X24)
  • OOR_SandBox - http://oor-03.cim3.net - http://sandbox.oor.net/    (3X25)
    • see also: OOR_SandBox_Customization    (3X26)
  • OOR_DevBox - http://oor-05.cim3.net - http://dev.oor.net/    (3X27)
  • a first OOR Test instance - http://oor-06.cim3.net - http://test-00.oor.net/    (3X28)
  • SOCoP_OOR - http://oor-04.cim3.net - http://socop.oor.net/ontologies    (3X29)
  • COLORE_OOR - http://colore.oor.net    (3X2A)
  • ORNL-DAAC - http://ornl-daac.oor.net    (3X2B)
  • MMI-ORR - http://mmisw.oor.net    (3X2C)
  • NCBO - BioPortal    (3X2D)
    • BioPortal's [bioontology-support] mailing list - see: https://mailman.stanford.edu/mailman/listinfo/bioontology-support    (3X2E)
  • NCBO-OOR development documentation - http://www.bioontology.org/wiki/index.php/NCBO-OOR_Development    (3X2F)